RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 OCA2Q04671 838 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 DPH6Q7L8W6 267 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 ANKRD12Q6UB98 2062 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
AFF4-201ENST00000265343 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 MRPL40Q9NQ50 206 aaKnown RBP16.4■□□□□ 0.22
AFF4-201ENST00000265343 TMCO5AQ8N6Q1 288 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 KLHL29Q96CT2 875 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
AFF4-201ENST00000265343 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 ATF2P15336 505 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 PDE6BP35913 854 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 KCNJ12Q14500 433 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 KCNK3O14649 394 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 TNNI2P48788 182 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
AFF4-201ENST00000265343 BEND3Q5T5X7 828 aa16.39■□□□□ 0.22
AFF4-201ENST00000265343 MAP7D3Q8IWC1 876 aa16.39■□□□□ 0.22
AFF4-201ENST00000265343 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 GSTA1P08263 222 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 GSTA2P09210 222 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 SLFNL1Q499Z3 407 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
AFF4-201ENST00000265343 SRRM1Q8IYB3 904 aaKnown RBP16.39■□□□□ 0.21
AFF4-201ENST00000265343 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 MRRFQ96E11 262 aaKnown RBP16.39■□□□□ 0.21
AFF4-201ENST00000265343 PDZD4Q76G19 769 aaPredicted RBP16.39■□□□□ 0.21
AFF4-201ENST00000265343 CSRNP1Q96S65 589 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 MEIS3Q99687 375 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
AFF4-201ENST00000265343 MAPK13O15264 365 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 MCF2P10911 925 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 SERPINB10P48595 397 aa16.39■□□□□ 0.21
AFF4-201ENST00000265343 CEP19Q96LK0 163 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 MSH6P52701 1360 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
AFF4-201ENST00000265343 GABPAQ06546 454 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
AFF4-201ENST00000265343 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 H7C1D1 291 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 HSPA6P17066 643 aa16.38■□□□□ 0.21
AFF4-201ENST00000265343 KPNA2P52292 529 aaKnown RBP16.38■□□□□ 0.21
AFF4-201ENST00000265343 SYCP2Q9BX26 1530 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 EEF1B2P24534 225 aaKnown RBP16.37■□□□□ 0.21
AFF4-201ENST00000265343 EMBQ6PCB8 327 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 ZC3H18Q86VM9 953 aaKnown RBP16.37■□□□□ 0.21
AFF4-201ENST00000265343 STOML1Q9UBI4 398 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 FAM8A1Q9UBU6 413 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 ATICP31939 592 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
AFF4-201ENST00000265343 SH2D4AQ9H788 454 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 INHBAP08476 426 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
AFF4-201ENST00000265343 RAB20Q9NX57 234 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 CHGBP05060 677 aa16.37■□□□□ 0.21
AFF4-201ENST00000265343 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
AFF4-201ENST00000265343 ATP6V1E1P36543 226 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 DRP2Q13474 957 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 CNPY4Q8N129 248 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 PSMB7Q99436 277 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 SERPINI2O75830 405 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 HDAC4P56524 1084 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 COPG1Q9Y678 874 aaKnown RBP16.36■□□□□ 0.21
AFF4-201ENST00000265343 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 MRPL44Q9H9J2 332 aaKnown RBP16.36■□□□□ 0.21
AFF4-201ENST00000265343 TTC38Q5R3I4 469 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 RINT1Q6NUQ1 792 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 PIP4K2CQ8TBX8 421 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 RUBCNQ92622 972 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 CALCRLQ16602 461 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 APLFQ8IW19 511 aaPredicted RBP16.36■□□□□ 0.21
AFF4-201ENST00000265343 SNRKQ9NRH2 765 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 NR1D1P20393 614 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 NR1H3Q13133 447 aa16.36■□□□□ 0.21
AFF4-201ENST00000265343 CALR3Q96L12 384 aaKnown RBP16.36■□□□□ 0.21
AFF4-201ENST00000265343 MORC3Q14149 939 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
AFF4-201ENST00000265343 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
AFF4-201ENST00000265343 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
AFF4-201ENST00000265343 LCA5Q86VQ0 697 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 TRIM11Q96F44 468 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 TM6SF1Q9BZW5 370 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
AFF4-201ENST00000265343 PRPF6O94906 941 aaKnown RBP16.35■□□□□ 0.21
AFF4-201ENST00000265343 GUCY2DQ02846 1103 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms