RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PLCB4Q15147 1175 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 DENND2CQ68D51 928 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 HIBCHQ6NVY1 386 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 C16orf71Q8IYS4 520 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 RAB17Q9H0T7 212 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 ZBTB3Q9H5J0 574 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SSX2IPQ9Y2D8 614 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 TRAF5O00463 557 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 BRD1O95696 1058 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 GNA14O95837 355 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 DEUP1Q05D60 604 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 LCA5Q86VQ0 697 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 ST13P4Q8IZP2 240 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 MAGEB6Q8N7X4 407 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 TRPM2O94759 1503 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 COPS6Q7L5N1 327 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 PROCA1Q8NCQ7 364 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 TRIM11Q96F44 468 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 RHBDL2Q9NX52 303 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SH3BP1Q9Y3L3 701 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 TBC1D8BQ0IIM8 1120 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 GDAP1L1Q96MZ0 367 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 EDC4Q6P2E9 1401 aaKnown RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 SPATA21Q7Z572 469 aa6.27□□□□□ -1.4
VCAN-201ENST00000265077 FBXO41Q8TF61 875 aa6.27□□□□□ -1.4
VCAN-201ENST00000265077 CLASP1Q7Z460 1538 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 FAM13AO94988 1023 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 CASP8Q14790 479 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 SRGAP1Q7Z6B7 1085 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 Q9H521 79 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 ATP6V0A4Q9HBG4 840 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 TNNI2P48788 182 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 RBM6P78332 1123 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 CUL4BQ13620 913 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 OLFM3Q96PB7 478 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 LZTS2Q9BRK4 669 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 NOC4LQ9BVI4 516 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 XAB2Q9HCS7 855 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 PARP2Q9UGN5 583 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 GAS8O95995 478 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 MAK16Q9BXY0 300 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 MYO1AQ9UBC5 1043 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 ACEP12821 1306 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 GNAT1P11488 350 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 CALUO43852 315 aaPredicted RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 SCRN1Q12765 414 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 NAA30Q147X3 362 aaPredicted RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 BCAP29Q9UHQ4 241 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 SAR1BQ9Y6B6 198 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 A0A1W2PP64 1363 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 EVI5O60447 810 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 PDE6BP35913 854 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 EIF4A2Q14240 407 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 PAK1Q13153 545 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 LGSNQ5TDP6 509 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 CSGALNACT2Q8N6G5 542 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 ARL10Q8N8L6 244 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 NUTM2BA6NNL0 878 aaPredicted RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 NUTM2EB1AL46 878 aaPredicted RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 CACTINQ8WUQ7 758 aaKnown RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 KIAA0232Q92628 1395 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 PER1O15534 1290 aaPredicted RBP6.27□□□□□ -1.41
VCAN-201ENST00000265077 TNFAIP3P21580 790 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 STX17P56962 302 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 Q4G0T1 1027 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 CEP70Q8NHQ1 597 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 PZPP20742 1482 aa6.27□□□□□ -1.41
VCAN-201ENST00000265077 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 DCAF17Q5H9S7 520 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 UHRF1BP1LA0JNW5 1464 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CROCC2H7BZ55 1655 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ATP10BO94823 1461 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CDC42BPBQ9Y5S2 1711 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 LRRIQ3A6PVS8 624 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 THOC1Q96FV9 657 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 CHGBP05060 677 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ARIH1Q9Y4X5 557 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 I3L4J1 428 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 PDHA1P08559 390 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 USP33Q8TEY7 942 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ZNF483Q8TF39 744 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 PAPOLBQ9NRJ5 636 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 RGS12O14924 1447 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 TLDC2A0PJX2 215 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 C6orf229H3BNL8 230 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 PAPOLAP51003 745 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 RAPGEF1Q13905 1077 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 DDX23Q9BUQ8 820 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 KIAA1468Q9P260 1216 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 SBNO2Q9Y2G9 1366 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 KRT9P35527 623 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 LMBR1LQ6UX01 489 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ZC3H18Q86VM9 953 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 TDRD7Q8NHU6 1098 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms