RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SPATA1Q5VX52 437 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 LRRN4CLQ8ND94 238 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 USP40Q9NVE5 1235 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 STX10O60499 249 aa22.25■■□□□ 1.15
CSPG5-201ENST00000264723 LIFRP42702 1097 aa22.25■■□□□ 1.15
CSPG5-201ENST00000264723 SLC35F6Q8N357 371 aa22.25■■□□□ 1.15
CSPG5-201ENST00000264723 IGDCC4Q8TDY8 1250 aa22.25■■□□□ 1.15
CSPG5-201ENST00000264723 NAPGQ99747 312 aaPredicted RBP22.25■■□□□ 1.15
CSPG5-201ENST00000264723 FOXP1Q9H334 677 aaPredicted RBP22.25■■□□□ 1.15
CSPG5-201ENST00000264723 LUC7LQ9NQ29 371 aaKnown RBP22.25■■□□□ 1.15
CSPG5-201ENST00000264723 KLRF2D3W0D1 207 aa22.25■■□□□ 1.15
CSPG5-201ENST00000264723 USO1O60763 962 aaKnown RBP22.25■■□□□ 1.15
CSPG5-201ENST00000264723 BIN2Q9UBW5 565 aaPredicted RBP22.25■■□□□ 1.15
CSPG5-201ENST00000264723 CTIFO43310 598 aaKnown RBP22.24■■□□□ 1.15
CSPG5-201ENST00000264723 PTPREP23469 700 aa22.24■■□□□ 1.15
CSPG5-201ENST00000264723 C10orf67Q8IYJ2 551 aa22.24■■□□□ 1.15
CSPG5-201ENST00000264723 PEAK1Q9H792 1746 aa22.24■■□□□ 1.15
CSPG5-201ENST00000264723 H0YHG0 523 aa22.24■■□□□ 1.15
CSPG5-201ENST00000264723 MORC3Q14149 939 aa22.24■■□□□ 1.15
CSPG5-201ENST00000264723 EFCAB8A8MWE9 144 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 KCNJ18B7U540 433 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 PNMA6AP0CW24 399 aaPredicted RBP22.23■■□□□ 1.15
CSPG5-201ENST00000264723 CYLC1P35663 651 aaPredicted RBP22.23■■□□□ 1.15
CSPG5-201ENST00000264723 KCNJ12Q14500 433 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 IL17RAQ96F46 866 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 PKD2L1Q9P0L9 805 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 NBPF11Q86T75 865 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.23■■□□□ 1.15
CSPG5-201ENST00000264723 PARD6BQ9BYG5 372 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 EPB41L4AQ9HCS5 686 aaPredicted RBP22.23■■□□□ 1.15
CSPG5-201ENST00000264723 HMGB2P26583 209 aaKnown RBP22.23■■□□□ 1.15
CSPG5-201ENST00000264723 KIF5AQ12840 1032 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 FERMT2Q96AC1 680 aa22.23■■□□□ 1.15
CSPG5-201ENST00000264723 SPDYE3A6NKU9 549 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 SCG2P13521 617 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 ITPK1Q13572 414 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 NOC4LQ9BVI4 516 aaKnown RBP22.22■■□□□ 1.15
CSPG5-201ENST00000264723 BSDC1Q9NW68 430 aaPredicted RBP22.22■■□□□ 1.15
CSPG5-201ENST00000264723 TBC1D7Q9P0N9 293 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 GDAQ9Y2T3 454 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 SEPT12Q8IYM1 358 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 FAM107BQ9H098 131 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 FAM207AQ9NSI2 230 aaPredicted RBP22.22■■□□□ 1.15
CSPG5-201ENST00000264723 USP17L3A6NCW0 530 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 USP17L4A6NCW7 530 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 SMCO2A6NFE2 343 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 SLC1A4P43007 532 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 PAFAH1B1P43034 410 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 USP17L1Q7RTZ2 530 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 ANKRD13CQ8N6S4 541 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 ENOX1Q8TC92 643 aaKnown RBP22.22■■□□□ 1.15
CSPG5-201ENST00000264723 PAGE5Q96GU1 130 aa22.22■■□□□ 1.15
CSPG5-201ENST00000264723 SRPRBQ9Y5M8 271 aaKnown RBP22.22■■□□□ 1.15
CSPG5-201ENST00000264723 USH1GQ495M9 461 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 CYP26C1Q6V0L0 522 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 KRT86O43790 486 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 FGFR1OPO95684 399 aaKnown RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 IBSPP21815 317 aaPredicted RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 MRPS25P82663 173 aaKnown RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 PPP2R5BQ15173 497 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 SLFN14P0C7P3 912 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 SLC44A5Q8NCS7 719 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 ARHGEF1Q92888 912 aaKnown RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 TSPYL1Q9H0U9 437 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 NOP2P46087 812 aaKnown RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 NONOQ15233 471 aaKnown RBP eCLIP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 GPR161Q8N6U8 529 aaKnown RBP22.21■■□□□ 1.15
CSPG5-201ENST00000264723 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
CSPG5-201ENST00000264723 SMIM22K7EJ46 135 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 USP8P40818 1118 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 BLIDQ8IZY5 108 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 TERF2Q15554 542 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 MAP9Q49MG5 647 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 NYAP1Q6ZVC0 841 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 TMTC1Q8IUR5 882 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 PTPROQ16827 1216 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 RGS22Q8NE09 1264 aa22.2■■□□□ 1.14
CSPG5-201ENST00000264723 CPDO75976 1380 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 RPS6KA4O75676 772 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 CLEC4GQ6UXB4 293 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 ENAHQ8N8S7 591 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 PDE11AQ9HCR9 933 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 RFX7Q2KHR2 1363 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 CSF1RP07333 972 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 MRPL12P52815 198 aaKnown RBP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 HLTFQ14527 1009 aaKnown RBP eCLIP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 RNF26Q9BY78 433 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 H0YIN7 160 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 POTEB2H3BUK9 544 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 PPP1R12BO60237 982 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 TECP42680 631 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 HDXQ7Z353 690 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 FOXP4Q8IVH2 680 aaPredicted RBP22.19■■□□□ 1.14
CSPG5-201ENST00000264723 TXLNBQ8N3L3 684 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 DBNDD1Q9H9R9 158 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 ZBTB21Q9ULJ3 1066 aa22.19■■□□□ 1.14
CSPG5-201ENST00000264723 CUL4BQ13620 913 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms