RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 A0A087WZG4 1122 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 CAPNS1P04632 268 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 CEACAM5P06731 702 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
CCDC54-201ENST00000261058 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 MRFAP1L1Q96HT8 127 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 WHRNQ9P202 907 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 KCNH3Q9ULD8 1083 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 TBX22Q9Y458 520 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 LOC105371045A0A1W2PR82 267 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 SIGLEC6O43699 453 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 CBX7O95931 251 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 NAT2P11245 290 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 HEATR6Q6AI08 1181 aaKnown RBP6.76□□□□□ -1.33
CCDC54-201ENST00000261058 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 ENOX1Q8TC92 643 aaKnown RBP6.76□□□□□ -1.33
CCDC54-201ENST00000261058 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
CCDC54-201ENST00000261058 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 DUSP15Q9H1R2 295 aaPredicted RBP6.76□□□□□ -1.33
CCDC54-201ENST00000261058 FAM86C1Q9NVL1 165 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 APEX2Q9UBZ4 518 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 ZMYM5Q9UJ78 669 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
CCDC54-201ENST00000261058 SHISA3A0PJX4 238 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 CLCN7P51798 805 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 ZNF445P59923 1031 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 TCEAL1Q15170 157 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 MSMPQ1L6U9 139 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 SPATC1Q76KD6 591 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 TMC3Q7Z5M5 1100 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
CCDC54-201ENST00000261058 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 HDAC8Q9BY41 377 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 LEMD3Q9Y2U8 911 aa6.75□□□□□ -1.33
CCDC54-201ENST00000261058 CCDC85CA6NKD9 419 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 CYP26A1O43174 497 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 ITGA4P13612 1032 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 NMIQ13287 307 aaPredicted RBP6.74□□□□□ -1.33
CCDC54-201ENST00000261058 MTERF2Q49AM1 385 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 THAP5Q7Z6K1 395 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 JAZF1Q86VZ6 243 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 LILRB2Q8N423 598 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 ARHGEF39Q8N4T4 335 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 DNAJC7Q99615 494 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 APBA2Q99767 749 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 GBP3Q9H0R5 595 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
CCDC54-201ENST00000261058 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
CCDC54-201ENST00000261058 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 ADCY3O60266 1144 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 PRAMEF1O95521 474 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 TGFB1P01137 390 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 IFI16Q16666 785 aaKnown RBP6.73□□□□□ -1.33
CCDC54-201ENST00000261058 GAB4Q2WGN9 574 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
CCDC54-201ENST00000261058 DAGLBQ8NCG7 672 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 MRGPRX3Q96LB0 322 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 SEMA6BQ9H3T3 888 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 SEMA3GQ9NS98 782 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
CCDC54-201ENST00000261058 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 DIAPH1O60610 1272 aaKnown RBP6.72□□□□□ -1.33
CCDC54-201ENST00000261058 PPM1BO75688 479 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 HOXA10P31260 410 aaPredicted RBP6.72□□□□□ -1.33
CCDC54-201ENST00000261058 IFRD2Q12894 506 aaPredicted RBP6.72□□□□□ -1.33
CCDC54-201ENST00000261058 NLGN1Q8N2Q7 840 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 BVESQ8NE79 360 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 FGD4Q96M96 766 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 LRRC4CQ9HCJ2 640 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
CCDC54-201ENST00000261058 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 DIS3Q9Y2L1 958 aaKnown RBP6.72□□□□□ -1.33
CCDC54-201ENST00000261058 EMC9Q9Y3B6 208 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 PITPNM2Q9BZ72 1349 aa6.72□□□□□ -1.33
CCDC54-201ENST00000261058 A0A1W2PQU0 124 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 FAM155AB1AL88 458 aaPredicted RBP6.71□□□□□ -1.34
CCDC54-201ENST00000261058 ITIH2P19823 946 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 CTSKP43235 329 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 LONRF2Q1L5Z9 754 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 TSPYL5Q86VY4 417 aaPredicted RBP6.71□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF227Q86WZ6 799 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
CCDC54-201ENST00000261058 RNPC3Q96LT9 517 aaKnown RBP6.71□□□□□ -1.34
CCDC54-201ENST00000261058 CHST7Q9NS84 486 aa6.71□□□□□ -1.34
CCDC54-201ENST00000261058 CADPSQ9ULU8 1353 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 TMEM265A0A087WTH1 108 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 ITGAVP06756 1048 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 SSRP1Q08945 709 aaKnown RBP6.7□□□□□ -1.34
CCDC54-201ENST00000261058 GRB10Q13322 594 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 SV2CQ496J9 727 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 C2orf27AQ580R0 203 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 ZMYM1Q5SVZ6 1142 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 TRIM59Q8IWR1 403 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 LRRC47Q8N1G4 583 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms