RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 STAG2Q8N3U4 1231 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 KANSL2Q9H9L4 492 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 SLC12A7Q9Y666 1083 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
NIP7-201ENST00000254940 FIBPO43427 364 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
NIP7-201ENST00000254940 ZNF157P51786 506 aaPredicted RBP14.07□□□□□ -0.16
NIP7-201ENST00000254940 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 TTBK2Q6IQ55 1244 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 ZNF654Q8IZM8 581 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 UBA5Q9GZZ9 404 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 VAT1LQ9HCJ6 419 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 PHIPQ8WWQ0 1821 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
NIP7-201ENST00000254940 CYP4F22Q6NT55 531 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 AGXT2Q9BYV1 514 aa14.07□□□□□ -0.16
NIP7-201ENST00000254940 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
NIP7-201ENST00000254940 CDC27P30260 824 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 KLHL40Q2TBA0 621 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 PAPPA2Q9BXP8 1791 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 NDUFB10O96000 172 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 FAM83BQ5T0W9 1011 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 LDLRAD1Q5T700 205 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 NBPF11Q86T75 865 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 ZNF280CQ8ND82 737 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 NSUN7Q8NE18 718 aaKnown RBP14.06□□□□□ -0.16
NIP7-201ENST00000254940 ALDH8A1Q9H2A2 487 aaPredicted RBP14.06□□□□□ -0.16
NIP7-201ENST00000254940 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
NIP7-201ENST00000254940 TMEM88BA6NKF7 163 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 GOLGA8AA7E2F4 631 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 F5H6K3 240 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
NIP7-201ENST00000254940 KLRC3Q07444 240 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 IKQ13123 557 aaPredicted RBP14.05□□□□□ -0.16
NIP7-201ENST00000254940 TREML2Q5T2D2 321 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 CATIPQ7Z7H3 387 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 PHKBQ93100 1093 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 FTOQ9C0B1 505 aaKnown RBP eCLIP14.05□□□□□ -0.16
NIP7-201ENST00000254940 ZBTB43O43298 467 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 PFKFB2O60825 505 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
NIP7-201ENST00000254940 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
NIP7-201ENST00000254940 AFG3L2Q9Y4W6 797 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
NIP7-201ENST00000254940 PTPDC1A2A3K4 754 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 DHX16O60231 1041 aaKnown RBP14.04□□□□□ -0.16
NIP7-201ENST00000254940 DGKHQ86XP1 1220 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 AOC2O75106 756 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 METAP2P50579 478 aaKnown RBP eCLIP14.04□□□□□ -0.16
NIP7-201ENST00000254940 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
NIP7-201ENST00000254940 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 NYAP2Q9P242 653 aa14.04□□□□□ -0.16
NIP7-201ENST00000254940 SLC1A4P43007 532 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 TROAPQ12815 778 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 MAP3K11Q16584 847 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
NIP7-201ENST00000254940 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 ERO1BQ86YB8 467 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 IL27Q8NEV9 243 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 WNK4Q96J92 1243 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 PTPRFP10586 1907 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 SMCHD1A6NHR9 2005 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 TMEM232C9JQI7 657 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 PDHBP11177 359 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 LIFRP42702 1097 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 SLC35G1Q2M3R5 365 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 SKOR2Q2VWA4 1001 aaPredicted RBP14.03□□□□□ -0.16
NIP7-201ENST00000254940 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
NIP7-201ENST00000254940 BACE1P56817 501 aa14.02□□□□□ -0.16
NIP7-201ENST00000254940 CEBPZQ03701 1054 aaKnown RBP14.02□□□□□ -0.16
NIP7-201ENST00000254940 RGMBQ6NW40 437 aa14.02□□□□□ -0.16
NIP7-201ENST00000254940 HOMER1Q86YM7 354 aa14.02□□□□□ -0.16
NIP7-201ENST00000254940 RASAL3Q86YV0 1011 aa14.02□□□□□ -0.16
NIP7-201ENST00000254940 FANCBQ8NB91 859 aa14.02□□□□□ -0.16
NIP7-201ENST00000254940 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.16
NIP7-201ENST00000254940 VCAM1P19320 739 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 FSTL1Q12841 308 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 RTN1Q16799 776 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 SGMS1Q86VZ5 419 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 VCPKMTQ9H867 229 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 MAD2L2Q9UI95 211 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 TLL2Q9Y6L7 1015 aa14.02□□□□□ -0.17
NIP7-201ENST00000254940 SYCE3A1L190 88 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms