RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SAMD15Q9P1V8 674 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 PDIA3P30101 505 aaKnown RBP21.01■□□□□ 0.95
PTPRE-201ENST00000254667 SMIM23A6NLE4 172 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 SLFN13Q68D06 897 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 DPY19L2Q6NUT2 758 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 DCUN1D2Q6PH85 259 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 MAIP1Q8WWC4 291 aa21.01■□□□□ 0.95
PTPRE-201ENST00000254667 CCDC6Q16204 474 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 DOK7Q18PE1 504 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 GPATCH4Q5T3I0 446 aaKnown RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 GLG1Q92896 1179 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 LONP1P36776 959 aaKnown RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 HEG1Q9ULI3 1381 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 SCNN1DP51172 638 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 TIGD1Q96MW7 591 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 PUS3Q9BZE2 481 aaKnown RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 QTRT2Q9H974 415 aaKnown RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 GTPBP6O43824 516 aaPredicted RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 RAD51AP2Q09MP3 1159 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 PRR16Q569H4 304 aa21■□□□□ 0.95
PTPRE-201ENST00000254667 UTP14CQ5TAP6 766 aaKnown RBP21■□□□□ 0.95
PTPRE-201ENST00000254667 FRMPD2Q68DX3 1309 aaPredicted RBP20.99■□□□□ 0.95
PTPRE-201ENST00000254667 N4BP1O75113 896 aaKnown RBP20.99■□□□□ 0.95
PTPRE-201ENST00000254667 XRCC5P13010 732 aaKnown RBP20.99■□□□□ 0.95
PTPRE-201ENST00000254667 ALAS1P13196 640 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 LRRC47Q8N1G4 583 aaKnown RBP20.99■□□□□ 0.95
PTPRE-201ENST00000254667 LAD1O00515 517 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 TRAPPC10P48553 1259 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 SETDB1Q15047 1291 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 ASPRV1Q53RT3 343 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 STAMQ92783 540 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 DAPK3O43293 454 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 ADORA1P30542 326 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 TERF1P54274 439 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 ABCB5Q2M3G0 1257 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 TEKT3Q9BXF9 490 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 SPC25Q9HBM1 224 aa20.99■□□□□ 0.95
PTPRE-201ENST00000254667 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
PTPRE-201ENST00000254667 TCP10L2B9ZVM9 353 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 MTX1Q13505 466 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 TRIM7Q9C029 511 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 A6NNZ2 444 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 PRPF6O94906 941 aaKnown RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 TECP42680 631 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 TUBB8Q3ZCM7 444 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 ZBTB8OSQ8IWT0 167 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 RNF26Q9BY78 433 aaPredicted RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 MLXIPQ9HAP2 919 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 DDX25Q9UHL0 483 aaKnown RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 TESPA1A2RU30 521 aaPredicted RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 CD19P15391 556 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 TRMT44Q8IYL2 757 aaKnown RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 PRR36Q9H6K5 1346 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 RPS6KA1Q15418 735 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 ZNF772Q68DY9 489 aaPredicted RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 FBXO18Q8NFZ0 1043 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 PKNOX2Q96KN3 472 aa20.98■□□□□ 0.95
PTPRE-201ENST00000254667 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
PTPRE-201ENST00000254667 NT5C2P49902 561 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 KRBA2Q6ZNG9 492 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 CFAP221Q4G0U5 840 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 KCNJ18B7U540 433 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 ZEB2O60315 1214 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 TNNI1P19237 187 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 KCNJ12Q14500 433 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 OGFRQ9NZT2 677 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 COL4A3BPQ9Y5P4 624 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 SERPINB2P05120 415 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 CMTR1Q8N1G2 835 aaKnown RBP20.97■□□□□ 0.95
PTPRE-201ENST00000254667 TMEM63CQ9P1W3 806 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 ZNF521Q96K83 1311 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 A0A1W2PQ27 194 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 A0A1W2PQ64 194 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 A0A1W2PQD8 194 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 hCG_1984214I3L0E3 225 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 RRAGAQ7L523 313 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 FNBP4Q8N3X1 1017 aaPredicted RBP20.97■□□□□ 0.95
PTPRE-201ENST00000254667 ZNF713Q8N859 430 aaPredicted RBP20.97■□□□□ 0.95
PTPRE-201ENST00000254667 TRERF1Q96PN7 1200 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 CUEDC2Q9H467 287 aa20.97■□□□□ 0.95
PTPRE-201ENST00000254667 METTL14Q9HCE5 456 aaKnown RBP20.97■□□□□ 0.95
PTPRE-201ENST00000254667 PRDM15P57071 1507 aaPredicted RBP20.96■□□□□ 0.95
PTPRE-201ENST00000254667 BTBD18B2RXH4 712 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 CEP104O60308 925 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 KRT19P08727 400 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 MORC3Q14149 939 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 CFAP157Q5JU67 520 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 NLRP10Q86W26 655 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 OR8K1Q8NGG5 319 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 XPO4Q9C0E2 1151 aaKnown RBP20.96■□□□□ 0.95
PTPRE-201ENST00000254667 FOXP1Q9H334 677 aaPredicted RBP20.96■□□□□ 0.95
PTPRE-201ENST00000254667 STAT1P42224 750 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 RPGRIP1Q96KN7 1286 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 AMNQ9BXJ7 453 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 LARSQ9P2J5 1176 aaKnown RBP20.96■□□□□ 0.95
PTPRE-201ENST00000254667 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 MAP7D1Q3KQU3 841 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 IFIH1Q9BYX4 1025 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms