RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 TIAM2Q8IVF5 1701 aa19.08■□□□□ 0.64
SSPN-201ENST00000242729 ATP2C1P98194 919 aaPredicted RBP19.08■□□□□ 0.64
SSPN-201ENST00000242729 NFIXQ14938 502 aa19.08■□□□□ 0.64
SSPN-201ENST00000242729 KRT31Q15323 416 aa19.08■□□□□ 0.64
SSPN-201ENST00000242729 PNMA1Q8ND90 353 aa19.08■□□□□ 0.64
SSPN-201ENST00000242729 TMEM60Q9H2L4 133 aa19.08■□□□□ 0.64
SSPN-201ENST00000242729 GYPCP04921 128 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 ERCC3P19447 782 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 ERCC5P28715 1186 aaPredicted RBP19.07■□□□□ 0.64
SSPN-201ENST00000242729 SH3RF1Q7Z6J0 888 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 TRIML1Q8N9V2 468 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 ZCCHC17Q9NP64 241 aaKnown RBP19.07■□□□□ 0.64
SSPN-201ENST00000242729 CACNA1SQ13698 1873 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 ZNF569Q5MCW4 686 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 IQUBQ8NA54 791 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 FERMT2Q96AC1 680 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 NUP88Q99567 741 aaPredicted RBP19.07■□□□□ 0.64
SSPN-201ENST00000242729 GTPBP4Q9BZE4 634 aaKnown RBP19.07■□□□□ 0.64
SSPN-201ENST00000242729 ARAP2Q8WZ64 1704 aa19.07■□□□□ 0.64
SSPN-201ENST00000242729 PNMA6AP0CW24 399 aaPredicted RBP19.06■□□□□ 0.64
SSPN-201ENST00000242729 NELFBQ8WX92 580 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 C8orf37Q96NL8 207 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 DUOX1Q9NRD9 1551 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 ZPR1O75312 459 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 SLC35G1Q2M3R5 365 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 KIFC2Q96AC6 838 aa19.06■□□□□ 0.64
SSPN-201ENST00000242729 DDAH1O94760 285 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 CCDC175P0C221 793 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 STAT6P42226 847 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 PMS1P54277 932 aaKnown RBP19.05■□□□□ 0.64
SSPN-201ENST00000242729 E2F4Q16254 413 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 PFKFB3Q16875 520 aaPredicted RBP19.05■□□□□ 0.64
SSPN-201ENST00000242729 TMCO3Q6UWJ1 677 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 TRIM10Q9UDY6 481 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 CALM1P0DP23 149 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 CALM2P0DP24 149 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 CALM3P0DP25 149 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 PRCPP42785 496 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 PDXDC2PQ6P474 469 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 GSDMAQ96QA5 445 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 ADGRG1Q9Y653 693 aa19.05■□□□□ 0.64
SSPN-201ENST00000242729 CDKAL1Q5VV42 579 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 BLIDQ8IZY5 108 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 SLF1Q9BQI6 1058 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 RNF216Q9NWF9 866 aaPredicted RBP19.04■□□□□ 0.64
SSPN-201ENST00000242729 PHLPP1O60346 1717 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 TSPY3P0CV98 308 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 TSPY8P0CW00 308 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 GYS2P54840 703 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 FILIP1LQ4L180 1135 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 UTP14CQ5TAP6 766 aaKnown RBP19.04■□□□□ 0.64
SSPN-201ENST00000242729 CLEC4GQ6UXB4 293 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 HPS3Q969F9 1004 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 COL16A1Q07092 1604 aaPredicted RBP19.04■□□□□ 0.64
SSPN-201ENST00000242729 SPATA31A5Q5VU36 1347 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 SPATA31A7Q8IWB4 1347 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 CYTH3O43739 400 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 MFAP3LO75121 409 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 RCAN1P53805 252 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 MAP3K9P80192 1104 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 MRFAP1Q9Y605 127 aa19.04■□□□□ 0.64
SSPN-201ENST00000242729 COL14A1Q05707 1796 aaKnown RBP19.03■□□□□ 0.64
SSPN-201ENST00000242729 CCDC194A0A1B0GVG4 234 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 RPN1P04843 607 aaKnown RBP19.03■□□□□ 0.64
SSPN-201ENST00000242729 PLA2G4AP47712 749 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 ERVK-24P63145 666 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 UBXN1Q04323 297 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 TERF2Q15554 542 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 CHP1Q99653 195 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 MTA3Q9BTC8 594 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 KCNJ18B7U540 433 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 SASH3O75995 380 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 PAK1Q13153 545 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 KCNJ12Q14500 433 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 WWC2Q6AWC2 1192 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 ELOA2Q8IYF1 753 aaPredicted RBP19.03■□□□□ 0.64
SSPN-201ENST00000242729 LRRC15Q8TF66 581 aa19.03■□□□□ 0.64
SSPN-201ENST00000242729 BMS1Q14692 1282 aaKnown RBP19.02■□□□□ 0.64
SSPN-201ENST00000242729 PPP2R5BQ15173 497 aa19.02■□□□□ 0.64
SSPN-201ENST00000242729 PARD6BQ9BYG5 372 aa19.02■□□□□ 0.64
SSPN-201ENST00000242729 ATP8A2Q9NTI2 1148 aa19.02■□□□□ 0.64
SSPN-201ENST00000242729 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.64
SSPN-201ENST00000242729 EFCAB8A8MWE9 144 aa19.02■□□□□ 0.63
SSPN-201ENST00000242729 ORC4O43929 436 aa19.02■□□□□ 0.63
SSPN-201ENST00000242729 LDHBP07195 334 aaKnown RBP19.02■□□□□ 0.63
SSPN-201ENST00000242729 EIF6P56537 245 aaKnown RBP19.02■□□□□ 0.63
SSPN-201ENST00000242729 KIF4BQ2VIQ3 1234 aa19.02■□□□□ 0.63
SSPN-201ENST00000242729 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.63
SSPN-201ENST00000242729 NKRFO15226 690 aaKnown RBP eCLIP19.01■□□□□ 0.63
SSPN-201ENST00000242729 MYO1BO43795 1136 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 FGRP09769 529 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 USP17L2Q6R6M4 530 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 FCHSD1Q86WN1 690 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 SLC35F6Q8N357 371 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
SSPN-201ENST00000242729 ARPP21Q9UBL0 812 aaPredicted RBP19.01■□□□□ 0.63
SSPN-201ENST00000242729 RHOXF2BP0C7M4 288 aa19.01■□□□□ 0.63
SSPN-201ENST00000242729 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms