RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KRT85P78386 507 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.04
SLIRP-201ENST00000238688 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 CHST3Q7LGC8 479 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 TGFBRAP1Q8WUH2 860 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 EHD4Q9H223 541 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.04
SLIRP-201ENST00000238688 VPS37CA5D8V6 355 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 RANBP6O60518 1105 aaKnown RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 CTDNEP1O95476 244 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 CETPP11597 493 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 SP3Q02447 781 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 RTN1Q16799 776 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 IFIT1BQ5T764 474 aaKnown RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 MCTP1Q6DN14 999 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 ZNF654Q8IZM8 581 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 NAP1L2Q9ULW6 460 aaPredicted RBP15.32■□□□□ 0.04
SLIRP-201ENST00000238688 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
SLIRP-201ENST00000238688 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 KIF5BP33176 963 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
SLIRP-201ENST00000238688 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-201ENST00000238688 ENAHQ8N8S7 591 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-201ENST00000238688 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
SLIRP-201ENST00000238688 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 LMBRD1Q9NUN5 540 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 RBBP6Q7Z6E9 1792 aaKnown RBP15.31■□□□□ 0.04
SLIRP-201ENST00000238688 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
SLIRP-201ENST00000238688 MGAMO43451 1857 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 JAK2O60674 1132 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 HLA-DOAP06340 250 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 CENPFP49454 3210 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 GNAQP50148 359 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 PICALMQ13492 652 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 FANCBQ8NB91 859 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 FBXO18Q8NFZ0 1043 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 ADGRA2Q96PE1 1338 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 RNF26Q9BY78 433 aaPredicted RBP15.3■□□□□ 0.04
SLIRP-201ENST00000238688 ZFYVE28Q9HCC9 887 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 ZCCHC17Q9NP64 241 aaKnown RBP15.3■□□□□ 0.04
SLIRP-201ENST00000238688 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
SLIRP-201ENST00000238688 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 TLR2O60603 784 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 DEXIO95424 95 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 XBP1P17861 261 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 GSE1Q14687 1217 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 NTRK3Q16288 839 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 LZTS2Q9BRK4 669 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
SLIRP-201ENST00000238688 DDX49Q9Y6V7 483 aaKnown RBP15.29■□□□□ 0.04
SLIRP-201ENST00000238688 TSPY3P0CV98 308 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 TSPY8P0CW00 308 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 PTPRAP18433 802 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 NOVP48745 357 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 UBE2HP62256 183 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 TRIM29Q14134 588 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
SLIRP-201ENST00000238688 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 CTCFLQ8NI51 663 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-201ENST00000238688 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-201ENST00000238688 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
SLIRP-201ENST00000238688 GPHNQ9NQX3 736 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-201ENST00000238688 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-201ENST00000238688 FAM196BA6NMK8 535 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 CXCL11O14625 94 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 TBC1D12O60347 775 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 FDPSP14324 419 aaKnown RBP15.27■□□□□ 0.04
SLIRP-201ENST00000238688 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 CTGFP29279 349 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 AKAP17AQ02040 695 aaKnown RBP15.27■□□□□ 0.04
SLIRP-201ENST00000238688 GABPAQ06546 454 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 TROAPQ12815 778 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 RESTQ13127 1097 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
SLIRP-201ENST00000238688 DDX11Q96FC9 970 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 FAM217BQ9NTX9 383 aaPredicted RBP15.27■□□□□ 0.04
SLIRP-201ENST00000238688 SERPINB13Q9UIV8 391 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
SLIRP-201ENST00000238688 CYP2D7A0A087X1C5 515 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms