RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SCNN1DP51172 638 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 SLC4A8Q2Y0W8 1093 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 FOXD4L5Q5VV16 416 aaPredicted RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 CTR9Q6PD62 1173 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 KIAA0825Q8IV33 1275 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 MAPKAPK5Q8IW41 473 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 NIM1KQ8IY84 436 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 FAM184AQ8NB25 1140 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 FOXD4L4Q8WXT5 416 aaPredicted RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 PSMD1Q99460 953 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 ZNF287Q9HBT7 754 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 ANGEL1Q9UNK9 670 aaKnown RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 CD2APQ9Y5K6 639 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 TIMP2P16035 220 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 PDCP20941 246 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 FSHRP23945 695 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 PICALMQ13492 652 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 COL9A3Q14050 684 aaPredicted RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 IQCA1Q86XH1 822 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 ZNF274Q96GC6 653 aaPredicted RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 MKNK2Q9HBH9 465 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
TTC1-201ENST00000231238 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
TTC1-201ENST00000231238 KCNA3P22001 575 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 DDIT3P35638 169 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
TTC1-201ENST00000231238 WTAPQ15007 396 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 CYB5R4Q7L1T6 521 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 TNPO1Q92973 898 aaKnown RBP11.39□□□□□ -0.59
TTC1-201ENST00000231238 TAOK3Q9H2K8 898 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 USP40Q9NVE5 1235 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 GAKO14976 1311 aa11.39□□□□□ -0.59
TTC1-201ENST00000231238 VPS37CA5D8V6 355 aaPredicted RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 PFKFB2O60825 505 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 PRDM1O75626 825 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 CYP2D6P10635 497 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 CRKP46108 304 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 WDR4P57081 412 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 ANTXR2P58335 489 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 TMTC2Q8N394 836 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 KCNQ5Q9NR82 932 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 MYO3BQ8WXR4 1341 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 H3BQV1 296 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 ZBTB43O43298 467 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 RAD17O75943 681 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 PTMSP20962 102 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 PDIA3P30101 505 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 METAP2P50579 478 aaKnown RBP eCLIP11.38□□□□□ -0.59
TTC1-201ENST00000231238 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 DACT2Q5SW24 774 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 LARP1BQ659C4 914 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 HHIPL2Q6UWX4 724 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 ZNF444Q8N0Y2 327 aaPredicted RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 ZKSCAN3Q9BRR0 538 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
TTC1-201ENST00000231238 AGXT2Q9BYV1 514 aa11.38□□□□□ -0.59
TTC1-201ENST00000231238 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 DLEC1Q9Y238 1755 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 STX6O43752 255 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 CDKL5O76039 1030 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 SCRN1Q12765 414 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 TRIM46Q7Z4K8 759 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms