RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KRT12Q99456 494 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 ATP8A2Q9NTI2 1148 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MUM1L1Q5H9M0 696 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 SH2D4BQ5SQS7 431 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 CCDC170Q8IYT3 715 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MGARPQ8TDB4 240 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MAIP1Q8WWC4 291 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 ATP10BO94823 1461 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 ESYT2A0FGR8 921 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MAGEA1P43355 309 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 RPS6KA1Q15418 735 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 KRT40Q6A162 431 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 NXNQ6DKJ4 435 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MCF2L2Q86YR7 1114 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 ATP2A3Q93084 1043 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 CCDC94Q9BW85 323 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 GIGYF1O75420 1035 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 GNA14O95837 355 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 MLKLQ8NB16 471 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 RAB3IPQ96QF0 476 aaPredicted RBP14.6□□□□□ -0.07
COL1A1-201ENST00000225964 PLCB1Q9NQ66 1216 aa14.6□□□□□ -0.07
COL1A1-201ENST00000225964 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 PANK4Q9NVE7 773 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 PIK3CAP42336 1068 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 POLA2Q14181 598 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 DPP9Q86TI2 863 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 NLRC4Q9NPP4 1024 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 FAM160B1Q5W0V3 765 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 OTUD7AQ8TE49 926 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 RPS8P62241 208 aaKnown RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 DMP1Q13316 513 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 PNOCQ13519 176 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 CTAGE3PQ8IX95 158 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 RSRC1Q96IZ7 334 aaKnown RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 RABEP2Q9H5N1 569 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 FAM207AQ9NSI2 230 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 LRFN2Q9ULH4 789 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 TRAPPC8Q9Y2L5 1435 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 FBXO11Q86XK2 927 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 NME8Q8N427 588 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 ZNF277Q9NRM2 450 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 TUBBP07437 444 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 ABCB4P21439 1286 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 BTDP43251 543 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 GYG1P46976 350 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 ABI1Q8IZP0 508 aa14.59□□□□□ -0.07
COL1A1-201ENST00000225964 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-201ENST00000225964 OSBPP22059 807 aa14.58□□□□□ -0.07
COL1A1-201ENST00000225964 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.07
COL1A1-201ENST00000225964 SLFN12Q8IYM2 578 aa14.58□□□□□ -0.07
COL1A1-201ENST00000225964 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.07
COL1A1-201ENST00000225964 IWS1Q96ST2 819 aa14.58□□□□□ -0.07
COL1A1-201ENST00000225964 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.07
COL1A1-201ENST00000225964 COL17A1Q9UMD9 1497 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 E7EWF7 191 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 TMOD1P28289 359 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 HADHQ16836 314 aaKnown RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 DENND2CQ68D51 928 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 DLATP10515 647 aaKnown RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 FEZ2Q9UHY8 353 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 LRRIQ4A6NIV6 560 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 SAT1P21673 171 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 SDR42E1Q8WUS8 393 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 AMFRQ9UKV5 643 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 TXNDC9O14530 226 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 ZBTB7BO15156 539 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-201ENST00000225964 AKT3Q9Y243 479 aa14.58□□□□□ -0.08
COL1A1-201ENST00000225964 PDE6CP51160 858 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-201ENST00000225964 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-201ENST00000225964 GOLGA8HP0CJ92 632 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 C1orf112Q9NSG2 853 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 PPEF1O14829 653 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-201ENST00000225964 PCK1P35558 622 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 MTX1Q13505 466 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 VCXQ9H320 206 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 SEPT9Q9UHD8 586 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-201ENST00000225964 SERTAD1Q9UHV2 236 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 USP17L21D6R901 530 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 DTNBO60941 627 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 XRCC5P13010 732 aaKnown RBP14.57□□□□□ -0.08
COL1A1-201ENST00000225964 Q3C1V9 767 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 AOX1Q06278 1338 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 TMEM191BP0C7N4 346 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 CFAP221Q4G0U5 840 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 FAM173BQ6P4H8 233 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 PPME1Q9Y570 386 aa14.57□□□□□ -0.08
COL1A1-201ENST00000225964 TUBB2AQ13885 445 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms