RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GNPATO15228 680 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 CALM1P0DP23 149 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 CALM2P0DP24 149 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 CALM3P0DP25 149 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 CNGA4Q8IV77 575 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 GNL3LQ9NVN8 582 aaKnown RBP19.55■□□□□ 0.72
USB1-201ENST00000219281 SPATA31A6Q5VVP1 1343 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 KRT31Q15323 416 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 E2F4Q16254 413 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 CTR9Q6PD62 1173 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 PIK3AP1Q6ZUJ8 805 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 SRBD1Q8N5C6 995 aaKnown RBP19.54■□□□□ 0.72
USB1-201ENST00000219281 ACRBPQ8NEB7 543 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 FUT8Q9BYC5 575 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 CCNL1Q9UK58 526 aaPredicted RBP19.54■□□□□ 0.72
USB1-201ENST00000219281 ZNF804BA4D1E1 1349 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 N4BP3O15049 544 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
USB1-201ENST00000219281 EVX2Q03828 476 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 IQUBQ8NA54 791 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 BRIP1Q9BX63 1249 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 VPS16Q9H269 839 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 CDC23Q9UJX2 597 aa19.54■□□□□ 0.72
USB1-201ENST00000219281 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 CNTNAP5Q8WYK1 1306 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 NMT2O60551 498 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 DDAH1O94760 285 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 CCDC24Q8N4L8 307 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
USB1-201ENST00000219281 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 DUOX1Q9NRD9 1551 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
USB1-201ENST00000219281 USP17L12C9JPN9 530 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 USP17L21D6R901 530 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 CDC25AP30304 524 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 MCM7P33993 719 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 NLRP5P59047 1200 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 IL17AQ16552 155 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 LONRF2Q1L5Z9 754 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 KIF4BQ2VIQ3 1234 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 JAKMIP3Q5VZ66 844 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 PDXDC2PQ6P474 469 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 SLC35F6Q8N357 371 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 GJD4Q96KN9 370 aaPredicted RBP19.53■□□□□ 0.72
USB1-201ENST00000219281 SETDB2Q96T68 719 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 MTRQ99707 1265 aa19.53■□□□□ 0.72
USB1-201ENST00000219281 LIMA1Q9UHB6 759 aaKnown RBP19.53■□□□□ 0.72
USB1-201ENST00000219281 BTAF1O14981 1849 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 ADAMTS3O15072 1205 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 ABL1P00519 1130 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 ERVK-24P63145 666 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 UBE4AQ14139 1066 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 CEP112Q8N8E3 955 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 TAB2Q9NYJ8 693 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 RWDD2AQ9UIY3 292 aa19.52■□□□□ 0.72
USB1-201ENST00000219281 THSD7AQ9UPZ6 1657 aa19.52■□□□□ 0.71
USB1-201ENST00000219281 CTAGE9A4FU28 777 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 CCDC151A5D8V7 595 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 RNF225M0QZC1 329 aaPredicted RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 FGRP09769 529 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 ST5P78524 1137 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 CTCFLQ8NI51 663 aaPredicted RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 ZNF384Q8TF68 577 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 ANKZF1Q9H8Y5 726 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 ABHD10Q9NUJ1 306 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 TTF2Q9UNY4 1162 aaKnown RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 MYH2Q9UKX2 1941 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 GTPBP6O43824 516 aaPredicted RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 ZPR1O75312 459 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 FECHP22830 423 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 COPB1P53618 953 aaKnown RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 PAK1Q13153 545 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 BRD3Q15059 726 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 FAM47AQ5JRC9 791 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 TMTC1Q8IUR5 882 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 NUP88Q99567 741 aaPredicted RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 CALCOCO1Q9P1Z2 691 aa19.51■□□□□ 0.71
USB1-201ENST00000219281 RTCBQ9Y3I0 505 aaKnown RBP19.51■□□□□ 0.71
USB1-201ENST00000219281 LRRC10BA6NIK2 292 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 CAVIN4Q5BKX8 364 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 NELFBQ8WX92 580 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 FAM84BQ96KN1 310 aaPredicted RBP19.5■□□□□ 0.71
USB1-201ENST00000219281 TFRCP02786 760 aaKnown RBP19.5■□□□□ 0.71
USB1-201ENST00000219281 SCG2P13521 617 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
USB1-201ENST00000219281 NEK11Q8NG66 645 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
USB1-201ENST00000219281 KCNJ18B7U540 433 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 PCP11498 1178 aaKnown RBP19.49■□□□□ 0.71
USB1-201ENST00000219281 RPS8P62241 208 aaKnown RBP19.49■□□□□ 0.71
USB1-201ENST00000219281 KCNJ12Q14500 433 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 TCP11X2Q5H9J9 407 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 NLRP3Q96P20 1036 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 NYXQ9GZU5 481 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 EP400Q96L91 3159 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 RPN1P04843 607 aaKnown RBP19.49■□□□□ 0.71
USB1-201ENST00000219281 SPAG1Q07617 926 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 ZNF658Q5TYW1 1059 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms