RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 POC1B-GALNT4F8VUJ3 575 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 SUN1O94901 812 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 TXKP42681 527 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 MTX1Q13505 466 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 MED4Q9NPJ6 270 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 EXOC3O60645 756 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 FANCCQ00597 558 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 GLE1Q53GS7 698 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 PIK3AP1Q6ZUJ8 805 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 NELFBQ8WX92 580 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 EIF6P56537 245 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 BCAS4Q8TDM0 211 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 AZI2Q9H6S1 392 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 MAGED2Q9UNF1 606 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 E9PMD0 336 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 STX1BP61266 288 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 TMTC1Q8IUR5 882 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 SLF1Q9BQI6 1058 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 ABCF3Q9NUQ8 709 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 MCF2P10911 925 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
SPTLC2-201ENST00000216484 NFKBIL1Q9UBC1 381 aaPredicted RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 CEP70Q8NHQ1 597 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 YY1AP1Q9H869 796 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 MAP3K7O43318 606 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 CDKL2Q92772 493 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 SYNJ2BP-COX16A0A087WUM0 186 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 SGK1O00141 431 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 RYBPQ8N488 228 aaPredicted RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 TAB3Q8N5C8 712 aaPredicted RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 COX16Q9P0S2 106 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 GRM8O00222 908 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 HSPA8P11142 646 aaKnown RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 IFT88Q13099 833 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 JDP2Q8WYK2 163 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 FRMD4AQ9P2Q2 1039 aaPredicted RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 KRT33BQ14525 404 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 HERC4Q5GLZ8 1057 aaPredicted RBP16■□□□□ 0.15
SPTLC2-201ENST00000216484 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
SPTLC2-201ENST00000216484 MAGEA1P43355 309 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 CDC26Q8NHZ8 85 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 TXLNGQ9NUQ3 528 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 DKC1O60832 514 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 NYXQ9GZU5 481 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 E2F5Q15329 346 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 TCP11Q8WWU5 503 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 STK24Q9Y6E0 443 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 ZFXP17010 805 aaPredicted RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 ATF2P15336 505 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 SLC4A7Q9Y6M7 1214 aa15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
SPTLC2-201ENST00000216484 MYRIPQ8NFW9 859 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 HADHQ16836 314 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 ATL3Q6DD88 541 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 LZICQ8WZA0 190 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 XPAP23025 273 aaPredicted RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 ZNF449Q6P9G9 518 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 NIP7Q9Y221 180 aaKnown RBP eCLIP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 GFAPP14136 432 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 CSRNP1Q96S65 589 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 NR1I2O75469 434 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 METTL14Q9HCE5 456 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 CCPG1Q9ULG6 757 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 PDZD4Q76G19 769 aaPredicted RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 N4BP2L2Q92802 583 aaPredicted RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 RINLQ6ZS11 566 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 DHX32Q7L7V1 743 aaKnown RBP15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 RNF169Q8NCN4 708 aa15.98■□□□□ 0.15
SPTLC2-201ENST00000216484 POSTNQ15063 836 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 H0YC42 278 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 HEXIM1O94992 359 aaKnown RBP15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 IL9RQ01113 521 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 UHMK1Q8TAS1 419 aaKnown RBP15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 DACH2Q96NX9 599 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 TAB2Q9NYJ8 693 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 GJC2Q5T442 439 aaPredicted RBP15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
SPTLC2-201ENST00000216484 FBXO2Q9UK22 296 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms