RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Tsg101Q61187 391 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ccdc57Q6PHN1 1016 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Luc7lQ9CYI4 371 aaKnown RBP8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cd274Q9EP73 290 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Adarb2Q9JI20 745 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tacc2Q9JJG0 1149 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm5580A0A0N4SVP8 411 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm1993A6X8I0 212 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Exoc3l2D3YUP5 789 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 SlxD3Z347 212 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Tom1O88746 492 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Jade2Q6ZQF7 829 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Bicdl2Q8CHW5 507 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Arpp21Q9DCB4 807 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Thsd7aQ69ZU6 1645 aa8.41□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Pfkfb3A7UAK5 555 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Apol7aB2RT54 418 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Dnm2P39054 870 aaKnown RBP8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Sec23aQ01405 765 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Mtss1lQ6P9S0 715 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Aggf1Q7TN31 711 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ppm1eQ80TL0 749 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Dclk3Q8BWQ5 790 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ulbp1Q8HWA3 334 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cabp7Q91ZM8 215 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Wdr64Q9D565 1086 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Pex3Q9QXY9 372 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 A0A1W2P6Q8 802 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm9048A0A1W2P7H4 802 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 A0A1W2P7Z8 802 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Gm9046A0A1W2P855 802 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Bpifb4A2BGH0 617 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 H2afxP27661 143 aaKnown RBP8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Cdh15P33146 784 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 LtbrP50284 415 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Mcm7Q61881 719 aaKnown RBP8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Usp50Q6P8X6 390 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Exoc8Q6PGF7 716 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Fam161bQ8CB59 589 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Ccdc14Q8K2J4 934 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Myo1hQ9D6A1 958 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 EhhadhQ9DBM2 718 aa8.4□□□□□ -1.06
Bdnf-207ENSMUST00000111047 Trap1aP19473 224 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Irf6P97431 467 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 VrtnQ3SYK4 740 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Prpf38aQ4FK66 312 aaKnown RBP8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 SltmQ8CH25 1031 aaKnown RBP8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 AdpgkQ8VDL4 496 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Fam217aQ9D9W6 419 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Sgpp1Q9JI99 430 aa8.4□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gucy1a2F8VQK3 730 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gjb4Q02738 266 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kif22Q3V300 660 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Slc9a1Q61165 820 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 GypcQ78HU7 95 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tex13cD3YU32 604 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nr1i2O54915 431 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Capza3P70190 299 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Scg2Q03517 617 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Zfp781Q0P5U5 243 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Arhgef2Q60875 985 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ces3aQ63880 571 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Maip1Q8BHE8 291 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 SowahdQ8BY98 327 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ces3bQ8VCU1 571 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Lzts2Q91YU6 671 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ssr1Q9CY50 286 aaKnown RBP8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Dynll2Q9D0M5 89 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tob2Q9JM55 345 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nr2e3Q9QXZ7 395 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ces1aE9PYP1 563 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Krt78E9Q0F0 1068 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tshz1Q5DTH5 1084 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ncapg2Q6DFV1 1138 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rbm26Q6NZN0 1012 aaKnown RBP8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Asic3Q6X1Y6 530 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Epn1Q80VP1 575 aa8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 HibadhQ99L13 335 aaKnown RBP8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tjp1P39447 1745 aaKnown RBP8.39□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Prss40A6H6T1 365 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 LdhaP06151 332 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mdh1P14152 334 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cct6aP80317 531 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ttll12Q3UDE2 639 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 MmeQ61391 750 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Madcam1Q61826 405 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Efcab8Q8C9R9 203 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 TxlnbQ8VBT1 685 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Uba5Q8VE47 403 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Slc5a4bQ91ZP4 660 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Sf3b3Q921M3 1217 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Card14Q99KF0 999 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc105Q9D4K7 499 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nap1l5Q9JJF0 156 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Itga2bQ9QUM0 1033 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ssc5dQ8BV57 1371 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Igsf9bE9PZ19 1328 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Atp8b5A3FIN4 1183 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cnbd1B1AWM0 430 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nr5a1P33242 462 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms