RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 WtipQ7TQJ8 398 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tor1aip1Q921T2 595 aaKnown RBP8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Usp16Q99LG0 825 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Stk31Q99MW1 1018 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Phf14Q9D4H9 881 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 FtmtQ9D5H4 237 aa8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 CarsQ9ER72 831 aaKnown RBP8.68□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Fpr-rs4A4FUQ5 323 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Zscan20B2KFW1 1030 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gm7347D3YYI9 267 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Hap1O35668 628 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Enc1O35709 589 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Rsph3aQ3UFY4 516 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Cobll1Q3UMF0 1273 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Cpa6Q5U901 438 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Trim27Q62158 513 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tiam2Q6ZPF3 1715 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ccdc116Q80X53 541 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Srp68Q8BMA6 625 aaKnown RBP8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 FlcnQ8QZS3 579 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 HmcesQ8R1M0 353 aaKnown RBP8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 CatsperzQ9CQP8 194 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Armcx1Q9CX83 456 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Phkg2Q9DB30 406 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Hic2Q9JLZ6 619 aaKnown RBP8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Sumo3Q9Z172 110 aa8.67□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 AlyrefO08583 255 aaKnown RBP8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Mcm4P49717 862 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 UtyP79457 1212 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Gspt2Q149F3 632 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Unc5clQ6R653 518 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 HhipQ7TN16 700 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tmco5bQ80X59 307 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Slfnl1Q8BHW9 410 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Hnrnpul1Q8VDM6 859 aaKnown RBP8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ssfa2Q922B9 1252 aa8.66□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ambra1A2AH22 1300 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Mtcl1Q3UHU5 1945 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 AU015836B2RUM3 263 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Magea8O89012 320 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Eif4a2P10630 407 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Wee1P47810 646 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 AdmP97297 184 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ccdc85bQ6PDY0 202 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Ireb2Q811J3 963 aaKnown RBP8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Fbxo9Q8BK06 437 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Cnpy4Q8BQ47 245 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Cd248Q91V98 765 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Slc10a6Q9CXB2 373 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 PtmsQ9D0J8 101 aaKnown RBP8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Trim42Q9D2H5 723 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Tktl2Q9D4D4 627 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Fzd5Q9EQD0 585 aa8.65□□□□□ -1.02
Ccdc47-202ENSMUST00000106865 Mical3Q8CJ19 1993 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Mrc1Q61830 1456 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Zbtb21E9Q444 1094 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Gstp2P46425 210 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Rplp1P47955 114 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Gnb5P62881 395 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Atp1b3P97370 278 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ppm1jQ149T7 507 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ppp1r26Q6A025 1163 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ubap2lQ80X50 1107 aaKnown RBP8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 SdhbQ9CQA3 282 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Q9DAE7 121 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Cabp2Q9JLK4 216 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Kif13bA0A286YCV9 1847 aa8.64□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ubn2Q80WC1 1314 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Scn9aQ62205 1984 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Nectin2P32507 530 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 TmpoQ61033 693 aaKnown RBP8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Nlgn2Q69ZK9 836 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ppip5k2Q6ZQB6 1129 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Sugp1Q8CH02 643 aaKnown RBP8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Fermt3Q8K1B8 665 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 PlvapQ91VC4 438 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Pdzd9Q9D9M4 266 aa8.63□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 TroapB7ZNG4 668 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Zc3h7aE9PWW6 970 aaKnown RBP8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Pde4aO89084 844 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Hspa8P63017 646 aaKnown RBP8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Irf3P70671 419 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Nucb1Q02819 459 aaKnown RBP8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 ZufspQ3T9Z9 577 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Q3USZ8 430 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Ssh1Q76I79 1042 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Adamtsl2Q7TSK7 957 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Pdcl3Q8BVF2 240 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Tmem39aQ9CYC3 486 aa8.62□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Lama4P97927 1816 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Sv2cQ69ZS6 727 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Dhx38Q80X98 1228 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Pdzph1Q8BGR1 1238 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Pak4Q8BTW9 593 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Fbxl13Q8CDU4 790 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Noc3lQ8VI84 807 aaKnown RBP8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 SharpinQ91WA6 380 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Mzb1Q9D8I1 188 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Vmn1r47Q9EQ51 310 aa8.61□□□□□ -1.03
Ccdc47-202ENSMUST00000106865 Nek4Q9Z1J2 792 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms