RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Hdac4Q6NZM9 1076 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Lrrc15Q80X72 579 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tmem60Q8K174 133 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ccdc14Q8K2J4 934 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rrp1bQ91YK2 724 aaKnown RBP18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Smc1bQ920F6 1248 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gm28042B7ZCM9 1014 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Aak1Q3UHJ0 959 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rbm12b2Q66JV4 834 aaKnown RBP18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rasgrp4Q8BTM9 673 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Znf131Q8K3J5 619 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gdap1l1Q8VE33 370 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 NapgQ9CWZ7 312 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Dynll2Q9D0M5 89 aa18.43■□□□□ 0.54
Trim8-201ENSMUST00000026008 Myh3P13541 1940 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tpp1O89023 562 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 GpiP06745 558 aaKnown RBP18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Nkx2-5P42582 318 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ctnna3Q65CL1 895 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ttll4Q80UG8 1193 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Spice1Q8C804 860 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Efcab8Q8C9R9 203 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Scrn1Q9CZC8 414 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Zcchc17Q9ESX4 241 aaKnown RBP18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 NesQ6P5H2 1864 aaKnown RBP18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rhbdl3P58873 404 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tube1Q9D6T1 475 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 FAM186AQ9D9R9 1790 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ulk4Q3V129 1303 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Nfil3O08750 462 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Cct6aP80317 531 aaKnown RBP18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ell2Q3UKU1 639 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Prpf40bQ80W14 870 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gpt2Q8BGT5 522 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Sgsm1Q8BPQ7 1093 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rassf4Q8CB96 322 aa18.42■□□□□ 0.54
Trim8-201ENSMUST00000026008 Slc39a2G3X943 309 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ccdc93Q7TQK5 629 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Q8C5C9 218 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 RarsQ9D0I9 660 aaKnown RBP18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tpcn1Q9EQJ0 817 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Rexo5D3YW29 759 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gm4307E9PZY4 289 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gm4312K9J7E2 289 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Vsnl1P62761 191 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Snai1Q02085 264 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Arglu1Q3UL36 271 aaKnown RBP18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Slc9a1Q61165 820 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gimap8Q75N62 688 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 GypcQ78HU7 95 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Epn1Q80VP1 575 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Srgap2Q91Z67 1071 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Arpp21Q9DCB4 807 aa18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Znf638Q61464 1960 aaKnown RBP18.41■□□□□ 0.54
Trim8-201ENSMUST00000026008 Map7d2A2AG50 781 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Pfkfb3A7UAK5 555 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ppef2O35385 757 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 DlatQ8BMF4 642 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Dact1Q8R4A3 778 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ginm1Q91WR6 327 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Cbx8Q9QXV1 362 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ubxn8Q9QZ49 277 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tom1O88746 492 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Kif23E9Q5G3 953 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ftl1P29391 183 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ptpn12P35831 775 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Kctd3Q8BFX3 815 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 1700018B08RikQ9DA83 213 aa18.4■□□□□ 0.54
Trim8-201ENSMUST00000026008 Enc1O35709 589 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Meis3P97368 378 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Tmem232Q5K6N0 675 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Myl6bQ8CI43 207 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Tktl2Q9D4D4 627 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Pex3Q9QXY9 372 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Ccdc73Q8CDM4 1066 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Pspc1Q8R326 523 aaKnown RBP18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Tmem39aQ9CYC3 486 aa18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Rai14Q9EP71 979 aaKnown RBP18.39■□□□□ 0.53
Trim8-201ENSMUST00000026008 Gpbp1Q6NXH3 473 aaKnown RBP18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Fchsd1Q6PFY1 688 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Fermt2Q8CIB5 680 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Slc14a2Q8R4T9 930 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Homer1Q9Z2Y3 366 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Smarcc1P97496 1104 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Ccdc34Q3UI66 367 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Lrp5Q91VN0 1614 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Znf609Q8BZ47 1413 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Ddx23D3Z0M9 819 aaKnown RBP18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Scgb2b19J3QM75 112 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Tmtc2Q56A06 836 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 MmeQ61391 750 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 HlfQ8BW74 295 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Uba5Q8VE47 403 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Q91WD4 421 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Ndufv1Q91YT0 464 aa18.38■□□□□ 0.53
Trim8-201ENSMUST00000026008 Cnbd1B1AWM0 430 aa18.37■□□□□ 0.53
Trim8-201ENSMUST00000026008 Serpina16D3Z660 418 aa18.37■□□□□ 0.53
Trim8-201ENSMUST00000026008 Krt78E9Q0F0 1068 aa18.37■□□□□ 0.53
Trim8-201ENSMUST00000026008 Gtpbp6Q3U6U5 514 aa18.37■□□□□ 0.53
Trim8-201ENSMUST00000026008 Lrrc1Q80VQ1 524 aa18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms