RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 PTPN21Q16825 1174 aa10.84□□□□□ -0.67
PAX6-273ENST00000640610 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
PAX6-273ENST00000640610 LCMT1Q9UIC8 334 aa10.84□□□□□ -0.67
PAX6-273ENST00000640610 ANKRD31Q8N7Z5 1873 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 DOCK2Q92608 1830 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 hCG_1642624A0A1W2PR95 340 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 FANCGO15287 622 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 FOXN1O15353 648 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 CDKL5O76039 1030 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 KLRK1P26718 216 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 DYNLL1P63167 89 aaKnown RBP10.83□□□□□ -0.68
PAX6-273ENST00000640610 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 NUP133Q8WUM0 1156 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 PARD6BQ9BYG5 372 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 MAP2K7O14733 419 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 MMP10P09238 476 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 UBASH3AP57075 661 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 SSRP1Q08945 709 aaKnown RBP10.83□□□□□ -0.68
PAX6-273ENST00000640610 NR5A1Q13285 461 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
PAX6-273ENST00000640610 LONRF2Q1L5Z9 754 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 ICE2Q659A1 982 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 NLRP3Q96P20 1036 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 PPP2R2CQ9Y2T4 447 aa10.83□□□□□ -0.68
PAX6-273ENST00000640610 POTEB2H3BUK9 544 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 LMOD1P29536 600 aaPredicted RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 TXLNAP40222 546 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 LIFRP42702 1097 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 SYKP43405 635 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 VSTM4Q8IW00 320 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 OXER1Q8TDS5 423 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 STAG1Q8WVM7 1258 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 HNRNPLLQ8WVV9 542 aaKnown RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 GEMIN8Q9NWZ8 242 aaKnown RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 RAI14Q9P0K7 980 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 RTL9Q8NET4 1388 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 PRDM1O75626 825 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 EIF3JO75822 258 aaKnown RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 ATP2B1P20020 1258 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 GTF2A1P52655 376 aaPredicted RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 GNG11P61952 73 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 PPARAQ07869 468 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 WTAPQ15007 396 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 CPLX2Q6PUV4 134 aaKnown RBP10.82□□□□□ -0.68
PAX6-273ENST00000640610 ILDR2Q71H61 639 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 ZNF384Q8TF68 577 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 HPSEQ9Y251 543 aa10.82□□□□□ -0.68
PAX6-273ENST00000640610 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 SERPINC1P01008 464 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 TUBB4BP68371 445 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 TRIM29Q14134 588 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 RTN1Q16799 776 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 CFAP100Q494V2 611 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 LONRF3Q496Y0 759 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 METTL16Q86W50 562 aaKnown RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 FOXP4Q8IVH2 680 aaPredicted RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 CELF1Q92879 486 aaKnown RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 KRT23Q9C075 422 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 HSD3B7Q9H2F3 369 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 JAG2Q9Y219 1238 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 GOLGB1Q14789 3259 aaKnown RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 CHD4Q14839 1912 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 H3BQF6 201 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 IFNAR1P17181 557 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 MAGEA9P43362 315 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 MYL5Q02045 173 aa10.81□□□□□ -0.68
PAX6-273ENST00000640610 DIS3L2Q8IYB7 885 aaKnown RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 MKRN1Q9UHC7 482 aaKnown RBP10.81□□□□□ -0.68
PAX6-273ENST00000640610 TIAM2Q8IVF5 1701 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 RESP18Q5W5W9 173 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 TMEM139Q8IV31 216 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 NOSTRINQ8IVI9 506 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 NACAP1Q9BZK3 213 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 STX10O60499 249 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 PPP6R2O75170 966 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 ERLIN1O75477 346 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 MMP1P03956 469 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 TTC31Q49AM3 519 aaPredicted RBP10.8□□□□□ -0.68
PAX6-273ENST00000640610 HDXQ7Z353 690 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 GRAMD1CQ8IYS0 662 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 ZNF654Q8IZM8 581 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 DPF2Q92785 391 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 WDR24Q96S15 920 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 PCDHB6Q9Y5E3 794 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 A0A1B0GUL6 1792 aa10.8□□□□□ -0.68
PAX6-273ENST00000640610 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
PAX6-273ENST00000640610 FAM177A1Q8N128 213 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms