RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 ORC4O43929 436 aa16.92■□□□□ 0.3
SDHD-209ENST00000640554 COA7Q96BR5 231 aa16.92■□□□□ 0.3
SDHD-209ENST00000640554 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
SDHD-209ENST00000640554 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
SDHD-209ENST00000640554 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
SDHD-209ENST00000640554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
SDHD-209ENST00000640554 IGKV6D-41A0A0C4DH26 115 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 PRDM1O75626 825 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 TTLL1O95922 423 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 CCNA1P78396 465 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 TFAP4Q01664 338 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 ATP2B2Q01814 1243 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
SDHD-209ENST00000640554 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 MYPNQ86TC9 1320 aa16.91■□□□□ 0.3
SDHD-209ENST00000640554 PLIN4Q96Q06 1357 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 LOC285556D6RIA3 1793 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 ZNF213O14771 459 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 TNPO2O14787 897 aaKnown RBP16.9■□□□□ 0.3
SDHD-209ENST00000640554 MAPK4P31152 587 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 ARMC5Q96C12 935 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 PTPRFP10586 1907 aa16.9■□□□□ 0.3
SDHD-209ENST00000640554 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 CHMLP26374 656 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 ERVK-24P63145 666 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 CAP1Q01518 475 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 MFSD6Q6ZSS7 791 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
SDHD-209ENST00000640554 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
SDHD-209ENST00000640554 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
SDHD-209ENST00000640554 CAPN15O75808 1086 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 CTGFP29279 349 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 IRF5Q13568 498 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 SLC9C1Q4G0N8 1177 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 TCP11L1Q9NUJ3 509 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 PTCH2Q9Y6C5 1203 aa16.88■□□□□ 0.29
SDHD-209ENST00000640554 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
SDHD-209ENST00000640554 F5H6K3 240 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
SDHD-209ENST00000640554 DSG3P32926 999 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 KLRC3Q07444 240 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
SDHD-209ENST00000640554 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 CLEC10AQ8IUN9 316 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 GMCL1P1Q8NEA9 526 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 PXYLP1Q8TE99 480 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
SDHD-209ENST00000640554 FLOT1O75955 427 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 FAM47AQ5JRC9 791 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 ESR2Q92731 530 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 TTC14Q96N46 770 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 TOMM22Q9NS69 142 aa16.86■□□□□ 0.29
SDHD-209ENST00000640554 FDX1P10109 184 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 GRK4P32298 578 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 NOVP48745 357 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 FLT3LGP49771 235 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 RGS19P49795 217 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 PRKCZQ05513 592 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 Q3C1V9 767 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 KIAA1755Q5JYT7 1200 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
SDHD-209ENST00000640554 SGSM2O43147 1006 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 RAD21O60216 631 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 NDUFB10O96000 172 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 CAPN2P17655 700 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 HAND2P61296 217 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
SDHD-209ENST00000640554 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
SDHD-209ENST00000640554 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 NUDT12Q9BQG2 462 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
SDHD-209ENST00000640554 GJD2Q9UKL4 321 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
SDHD-209ENST00000640554 STRNO43815 780 aa16.83■□□□□ 0.28
SDHD-209ENST00000640554 ADCY3O60266 1144 aa16.83■□□□□ 0.28
SDHD-209ENST00000640554 CNMDO75829 334 aa16.83■□□□□ 0.28
SDHD-209ENST00000640554 XRCC5P13010 732 aaKnown RBP16.83■□□□□ 0.28
SDHD-209ENST00000640554 COPB2P35606 906 aa16.83■□□□□ 0.28
SDHD-209ENST00000640554 UBXN2AP68543 259 aa16.83■□□□□ 0.28
SDHD-209ENST00000640554 RRP12Q5JTH9 1297 aaKnown RBP16.83■□□□□ 0.28
SDHD-209ENST00000640554 FAM83BQ5T0W9 1011 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms