RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 GOLGA8AA7E2F4 631 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 SNHG28P0DPA3 235 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 FMR1Q06787 632 aaKnown RBP eCLIP24.31■■□□□ 1.48
SCARB2-219ENST00000639738 MAP3K11Q16584 847 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 SYNE3Q6ZMZ3 975 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 CCDC144CPQ8IYA2 1237 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 ZKSCAN4Q969J2 545 aaPredicted RBP24.31■■□□□ 1.48
SCARB2-219ENST00000639738 WRNIP1Q96S55 665 aa24.31■■□□□ 1.48
SCARB2-219ENST00000639738 LLPHQ9BRT6 129 aaKnown RBP24.31■■□□□ 1.48
SCARB2-219ENST00000639738 TRAF5O00463 557 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 CALM1P0DP23 149 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 CALM2P0DP24 149 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 CALM3P0DP25 149 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 FUT2Q10981 343 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 GRM4Q14833 912 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.3■■□□□ 1.48
SCARB2-219ENST00000639738 RASGRP2Q7LDG7 609 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 SCYL3Q8IZE3 742 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 LRRC47Q8N1G4 583 aaKnown RBP24.3■■□□□ 1.48
SCARB2-219ENST00000639738 ACER1Q8TDN7 264 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 SYNPO2Q9UMS6 1093 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 PPP2R5BQ15173 497 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 CCDC84Q86UT8 332 aaPredicted RBP24.3■■□□□ 1.48
SCARB2-219ENST00000639738 NUP133Q8WUM0 1156 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 DAXXQ9UER7 740 aaPredicted RBP24.3■■□□□ 1.48
SCARB2-219ENST00000639738 MAD2L2Q9UI95 211 aa24.3■■□□□ 1.48
SCARB2-219ENST00000639738 PCNTO95613 3336 aa24.29■■□□□ 1.48
SCARB2-219ENST00000639738 PALM3A6NDB9 673 aaPredicted RBP24.29■■□□□ 1.48
SCARB2-219ENST00000639738 JAK2O60674 1132 aa24.29■■□□□ 1.48
SCARB2-219ENST00000639738 ITGBL1O95965 494 aaPredicted RBP24.29■■□□□ 1.48
SCARB2-219ENST00000639738 ECE1P42892 770 aa24.29■■□□□ 1.48
SCARB2-219ENST00000639738 RTN1Q16799 776 aa24.29■■□□□ 1.48
SCARB2-219ENST00000639738 TMX2Q9Y320 296 aa24.29■■□□□ 1.48
SCARB2-219ENST00000639738 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.29■■□□□ 1.48
SCARB2-219ENST00000639738 PDHBP11177 359 aa24.28■■□□□ 1.48
SCARB2-219ENST00000639738 FDPSP14324 419 aaKnown RBP24.28■■□□□ 1.48
SCARB2-219ENST00000639738 PRKG1Q13976 671 aa24.28■■□□□ 1.48
SCARB2-219ENST00000639738 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
SCARB2-219ENST00000639738 NBPF11Q86T75 865 aa24.28■■□□□ 1.48
SCARB2-219ENST00000639738 USP17L5A8MUK1 530 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 PPP1R12BO60237 982 aaPredicted RBP24.27■■□□□ 1.48
SCARB2-219ENST00000639738 PTPRAP18433 802 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 MAP3K9P80192 1104 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 KIAA1755Q5JYT7 1200 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 MOB2Q70IA6 237 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 STAG2Q8N3U4 1231 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 GMCL1P1Q8NEA9 526 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 SNCAIPQ9Y6H5 919 aa24.27■■□□□ 1.48
SCARB2-219ENST00000639738 IFNAR1P17181 557 aa24.26■■□□□ 1.47
SCARB2-219ENST00000639738 TMTC3Q6ZXV5 915 aa24.26■■□□□ 1.47
SCARB2-219ENST00000639738 WDR18Q9BV38 432 aa24.26■■□□□ 1.47
SCARB2-219ENST00000639738 DHX16O60231 1041 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 PLEKHA8P1O95397 391 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 ATP2B2Q01814 1243 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 VGLL4Q14135 290 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 LDLRAD1Q5T700 205 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 CHADLQ6NUI6 762 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 SRBD1Q8N5C6 995 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 CHMP4CQ96CF2 233 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 CWC22Q9HCG8 908 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 RBM28Q9NW13 759 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 TRPM7Q96QT4 1865 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 PTPDC1A2A3K4 754 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 F5H6K3 240 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 GJB2P29033 226 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 NF2P35240 595 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 KLRC3Q07444 240 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 USP17L2Q6R6M4 530 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 CMTR1Q8N1G2 835 aaKnown RBP24.25■■□□□ 1.47
SCARB2-219ENST00000639738 ARHGEF10LQ9HCE6 1279 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 SMC3Q9UQE7 1217 aa24.25■■□□□ 1.47
SCARB2-219ENST00000639738 CCDC196A0A1B0GTZ2 297 aa24.24■■□□□ 1.47
SCARB2-219ENST00000639738 IREB2P48200 963 aaKnown RBP24.24■■□□□ 1.47
SCARB2-219ENST00000639738 ZNF543Q08ER8 600 aa24.24■■□□□ 1.47
SCARB2-219ENST00000639738 CTCFLQ8NI51 663 aaPredicted RBP24.24■■□□□ 1.47
SCARB2-219ENST00000639738 BAZ2BQ9UIF8 2168 aaKnown RBP24.24■■□□□ 1.47
SCARB2-219ENST00000639738 MYH6P13533 1939 aa24.23■■□□□ 1.47
SCARB2-219ENST00000639738 PPFIA3O75145 1194 aa24.23■■□□□ 1.47
SCARB2-219ENST00000639738 NDUFB10O96000 172 aa24.23■■□□□ 1.47
SCARB2-219ENST00000639738 GMCL1Q96IK5 515 aa24.23■■□□□ 1.47
SCARB2-219ENST00000639738 PTPRFP10586 1907 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 GOLGA8HP0CJ92 632 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 KIF5BP33176 963 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 SLFN13Q68D06 897 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 DCAF4Q8WV16 495 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 PHKBQ93100 1093 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 KIAA1683Q9H0B3 1180 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 VCPKMTQ9H867 229 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 CNTNAP5Q8WYK1 1306 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 STK36Q9NRP7 1315 aa24.22■■□□□ 1.47
SCARB2-219ENST00000639738 UBE2Q2LH0YL09 131 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 CPLX1O14810 134 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 CYTH3O43739 400 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 FMNL1O95466 1100 aaPredicted RBP24.21■■□□□ 1.47
SCARB2-219ENST00000639738 PARP1P09874 1014 aaKnown RBP24.21■■□□□ 1.47
SCARB2-219ENST00000639738 DDX11Q96FC9 970 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 CLMNQ96JQ2 1002 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
SCARB2-219ENST00000639738 MTMR7Q9Y216 660 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms