RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 CACNB3P54284 484 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 NLRP5P59047 1200 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 SLC35G1Q2M3R5 365 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 ZFPM1Q8IX07 1006 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
TARDBP-230ENST00000639083 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-230ENST00000639083 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 SERPINB13Q9UIV8 391 aa12.4□□□□□ -0.42
TARDBP-230ENST00000639083 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
TARDBP-230ENST00000639083 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-230ENST00000639083 ESPNB1AK53 854 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 ADCY5O95622 1261 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 SYKP43405 635 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 ZNF165P49910 485 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 FKBP1AP62942 108 aaKnown RBP12.39□□□□□ -0.43
TARDBP-230ENST00000639083 GRIN1Q05586 938 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 RESP18Q5W5W9 173 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
TARDBP-230ENST00000639083 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 MRIQ9BWK5 157 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 TCP10Q12799 353 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 CPVLQ9H3G5 476 aa12.39□□□□□ -0.43
TARDBP-230ENST00000639083 MYH1P12882 1939 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 TRIM75PA6NK02 468 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
TARDBP-230ENST00000639083 AKR1B1P15121 316 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 PTPREP23469 700 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 NOVP48745 357 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-230ENST00000639083 MYH6P13533 1939 aa12.38□□□□□ -0.43
TARDBP-230ENST00000639083 YDJCA8MPS7 323 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 WNT7AO00755 349 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 EIF6P56537 245 aaKnown RBP12.37□□□□□ -0.43
TARDBP-230ENST00000639083 STX1AQ16623 288 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-230ENST00000639083 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 CEP131Q9UPN4 1083 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 QSER1Q2KHR3 1735 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 FAM237AA0A1B0GTK4 181 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 PARP1P09874 1014 aaKnown RBP12.37□□□□□ -0.43
TARDBP-230ENST00000639083 KCNA3P22001 575 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 SHMT1P34896 483 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
TARDBP-230ENST00000639083 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 SRPRBQ9Y5M8 271 aaKnown RBP12.37□□□□□ -0.43
TARDBP-230ENST00000639083 ADAMTSL1Q8N6G6 1762 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 SCN9AQ15858 1988 aa12.37□□□□□ -0.43
TARDBP-230ENST00000639083 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 CAVIN2O95810 425 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 DPEP1P16444 411 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 ZNF174Q15697 407 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 PIK3AP1Q6ZUJ8 805 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 TIGD1Q96MW7 591 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 HEATR3Q7Z4Q2 680 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 ANO10Q9NW15 660 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 NOL7Q9UMY1 257 aaKnown RBP12.36□□□□□ -0.43
TARDBP-230ENST00000639083 C10orf71Q711Q0 1435 aa12.36□□□□□ -0.43
TARDBP-230ENST00000639083 FOCADQ5VW36 1801 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 BIN1O00499 593 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 CALML3P27482 149 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 IQCB1Q15051 598 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 CCDC93Q567U6 631 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 UBA5Q9GZZ9 404 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms