RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 BACE1P56817 501 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 ICA1Q05084 483 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 C2orf69Q8N8R5 385 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 LRRC37A2A6NM11 1700 aa12.03□□□□□ -0.48
KCNMA1-240ENST00000638575 PDHBP11177 359 aa12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 PSMA5P28066 241 aa12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 NF2P35240 595 aa12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 IL27Q8NEV9 243 aa12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 GMCL1Q96IK5 515 aa12.02□□□□□ -0.48
KCNMA1-240ENST00000638575 RCAN1P53805 252 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 RABEP1Q15276 862 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 NTRK3Q16288 839 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 APOA5Q6Q788 366 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 TSHZ2Q9NRE2 1034 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 ADAMTS5Q9UNA0 930 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 RGMBQ6NW40 437 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
KCNMA1-240ENST00000638575 BRCA2P51587 3418 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 DNAJC5GQ8N7S2 189 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 SNX21Q969T3 373 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 MTMR8Q96EF0 704 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 ZNF236Q9UL36 1845 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 CXCL11O14625 94 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 CLIP2Q9UDT6 1046 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 PLA2G6O60733 806 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 NDUFB10O96000 172 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 HUNKP57058 714 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 MTMR2Q13614 643 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 RAB3GAP1Q15042 981 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
KCNMA1-240ENST00000638575 CDC27P30260 824 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 C1QTNF8P60827 252 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 GRM4Q14833 912 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 ME3Q16798 604 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 TREML2Q5T2D2 321 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 LRRC47Q8N1G4 583 aaKnown RBP12□□□□□ -0.49
KCNMA1-240ENST00000638575 REPS2Q8NFH8 660 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 CYTH3O43739 400 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 APOBRQ0VD83 1088 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 SPP2Q13103 211 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 RALYLQ86SE5 291 aaKnown RBP12□□□□□ -0.49
KCNMA1-240ENST00000638575 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
KCNMA1-240ENST00000638575 F5H6K3 240 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
KCNMA1-240ENST00000638575 VCAM1P19320 739 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
KCNMA1-240ENST00000638575 HTRA3P83110 453 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 KLRC3Q07444 240 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 TRDNQ13061 729 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 IQCA1Q86XH1 822 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 PNMA1Q8ND90 353 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 BRF1Q92994 677 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 CSADQ9Y600 493 aa12□□□□□ -0.49
KCNMA1-240ENST00000638575 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 DDAH1O94760 285 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 NEK4P51957 841 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 WTAPQ15007 396 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 STAG2Q8N3U4 1231 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 MYH15Q9Y2K3 1946 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 C19orf81C9J6K1 198 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 TM4SF4P48230 202 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 MPHOSPH10O00566 681 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 PFKFB2O60825 505 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 ZNF543Q08ER8 600 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 LBX2Q6XYB7 198 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
KCNMA1-240ENST00000638575 SCRN1Q12765 414 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 CUL4AQ13619 759 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 IFIT1BQ5T764 474 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 IGF2BP3O00425 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 LPAR1Q92633 364 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 CNMDO75829 334 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 USP17L2Q6R6M4 530 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 CATSPERGQ6ZRH7 1159 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
KCNMA1-240ENST00000638575 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms