RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SWAP70Q9UH65 585 aa19.68■□□□□ 0.74
COLCA2-206ENST00000638573 SGPL1O95470 568 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 USP14P54578 494 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 ATP2B2Q01814 1243 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 LRRFIP1Q32MZ4 808 aaKnown RBP19.67■□□□□ 0.74
COLCA2-206ENST00000638573 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 CENPQQ7L2Z9 268 aaPredicted RBP19.67■□□□□ 0.74
COLCA2-206ENST00000638573 USP6NLQ92738 828 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 TANGO6Q9C0B7 1094 aa19.67■□□□□ 0.74
COLCA2-206ENST00000638573 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.67■□□□□ 0.748e-6■□□□□ 10.8
COLCA2-206ENST00000638573 PAK6Q9NQU5 681 aaPredicted RBP19.67■□□□□ 0.74
COLCA2-206ENST00000638573 MINDY4BA8MYZ0 360 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 HMGCRP04035 888 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 EEF2P13639 858 aaKnown RBP19.66■□□□□ 0.74
COLCA2-206ENST00000638573 MORN1Q5T089 497 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 WDR78Q5VTH9 848 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 FLRT1Q9NZU1 646 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 RABGAP1Q9Y3P9 1069 aa19.66■□□□□ 0.74
COLCA2-206ENST00000638573 H0YGN5 161 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 PRDM1O75626 825 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 FARP2O94887 1054 aaPredicted RBP19.65■□□□□ 0.74
COLCA2-206ENST00000638573 RASA1P20936 1047 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 ERICH6BQ5W0A0 696 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 PLEKHH3Q7Z736 793 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 ATG4CQ96DT6 458 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 NUDT12Q9BQG2 462 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 FBXO28Q9NVF7 368 aa19.65■□□□□ 0.74
COLCA2-206ENST00000638573 FOXP2O15409 715 aa19.64■□□□□ 0.73
COLCA2-206ENST00000638573 SLC34A2O95436 690 aa19.64■□□□□ 0.73
COLCA2-206ENST00000638573 TFRCP02786 760 aaKnown RBP19.64■□□□□ 0.73
COLCA2-206ENST00000638573 MAPK4P31152 587 aa19.64■□□□□ 0.73
COLCA2-206ENST00000638573 VCPKMTQ9H867 229 aa19.64■□□□□ 0.73
COLCA2-206ENST00000638573 TMX2Q9Y320 296 aa19.64■□□□□ 0.73
COLCA2-206ENST00000638573 PRKAR2AP13861 404 aaKnown RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 CCND3P30281 292 aaPredicted RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 LBX2Q6XYB7 198 aa19.63■□□□□ 0.73
COLCA2-206ENST00000638573 PLEKHM2Q8IWE5 1019 aa19.63■□□□□ 0.73
COLCA2-206ENST00000638573 CCAR1Q8IX12 1150 aaKnown RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 NPLOC4Q8TAT6 608 aa19.63■□□□□ 0.73
COLCA2-206ENST00000638573 NKX2-3Q8TAU0 364 aa19.63■□□□□ 0.73
COLCA2-206ENST00000638573 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
COLCA2-206ENST00000638573 NUP88Q99567 741 aaPredicted RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 MOV10L1Q9BXT6 1211 aaKnown RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 ARPP21Q9UBL0 812 aaPredicted RBP19.63■□□□□ 0.73
COLCA2-206ENST00000638573 RAD21O60216 631 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 APPP05067 770 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 ZFYP08048 801 aaPredicted RBP19.62■□□□□ 0.73
COLCA2-206ENST00000638573 TDO2P48775 406 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 CACNB2Q08289 660 aaPredicted RBP19.62■□□□□ 0.73
COLCA2-206ENST00000638573 SBK1Q52WX2 424 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 ZMYM1Q5SVZ6 1142 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 AMOTL1Q8IY63 956 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 SOCS4Q8WXH5 440 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 DPF3Q92784 378 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 CCDC17Q96LX7 622 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 CRISPLD2Q9H0B8 497 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 OSBPL3Q9H4L5 887 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 ARHGEF10LQ9HCE6 1279 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 INCENPQ9NQS7 918 aa19.62■□□□□ 0.73
COLCA2-206ENST00000638573 FLOT1O75955 427 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 ZKSCAN1P17029 563 aaPredicted RBP19.61■□□□□ 0.73
COLCA2-206ENST00000638573 MNX1P50219 401 aaPredicted RBP19.61■□□□□ 0.73
COLCA2-206ENST00000638573 MAP2K5Q13163 448 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 COG2Q14746 738 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 MAP3K21Q5TCX8 1036 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
COLCA2-206ENST00000638573 EVI5LQ96CN4 794 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 PAWRQ96IZ0 340 aaKnown RBP19.61■□□□□ 0.73
COLCA2-206ENST00000638573 CWC22Q9HCG8 908 aaKnown RBP19.61■□□□□ 0.73
COLCA2-206ENST00000638573 TACC3Q9Y6A5 838 aa19.61■□□□□ 0.73
COLCA2-206ENST00000638573 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 RPTORQ8N122 1335 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 TRIM6-TRIM34B2RNG4 842 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 PTPREP23469 700 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 DSG3P32926 999 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 RGS2P41220 211 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 IFNL3Q8IZI9 196 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 CHMP4CQ96CF2 233 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 APBA2Q99767 749 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 HMX1Q9NP08 348 aaPredicted RBP19.6■□□□□ 0.73
COLCA2-206ENST00000638573 COLQQ9Y215 455 aaPredicted RBP19.6■□□□□ 0.73
COLCA2-206ENST00000638573 RLFQ13129 1914 aa19.6■□□□□ 0.73
COLCA2-206ENST00000638573 PLS1Q14651 629 aa19.59■□□□□ 0.73
COLCA2-206ENST00000638573 SPATC1LQ9H0A9 340 aa19.59■□□□□ 0.73
COLCA2-206ENST00000638573 PATL2C9JE40 543 aaKnown RBP19.58■□□□□ 0.72
COLCA2-206ENST00000638573 XRCC5P13010 732 aaKnown RBP19.58■□□□□ 0.72
COLCA2-206ENST00000638573 ERCC3P19447 782 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 PDE4AP27815 886 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 CYP2C19P33261 490 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 GRB14Q14449 540 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 TMEM132BQ14DG7 1078 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 HABP4Q5JVS0 413 aaKnown RBP19.58■□□□□ 0.72
COLCA2-206ENST00000638573 GIMAP6Q6P9H5 292 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 RILPL2Q969X0 211 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
COLCA2-206ENST00000638573 KANSL2Q9H9L4 492 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms