RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PBX4Q9BYU1 374 aa22.33■■□□□ 1.17
CLN6-212ENST00000636020 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 HLA-DOAP06340 250 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 FAAP100Q0VG06 881 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 TATDN1Q6P1N9 297 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 ATF7IPQ6VMQ6 1270 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 SHCBP1Q8NEM2 672 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
CLN6-212ENST00000636020 RPAP3Q9H6T3 665 aaPredicted RBP22.32■■□□□ 1.16
CLN6-212ENST00000636020 GRXCR1A8MXD5 290 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 ADGRA1Q86SQ6 560 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 TOX2Q96NM4 488 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 NECAB3Q96P71 396 aaPredicted RBP22.31■■□□□ 1.16
CLN6-212ENST00000636020 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 XPNPEP3Q9NQH7 507 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 SLC5A4Q9NY91 659 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 HDAC5Q9UQL6 1122 aa22.31■■□□□ 1.16
CLN6-212ENST00000636020 FOCADQ5VW36 1801 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 A0A1W2PQ45 241 aaPredicted RBP22.3■■□□□ 1.16
CLN6-212ENST00000636020 A0A1W2PQY0 241 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 ERCC3P19447 782 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 RAB3GAP1Q15042 981 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 RASIP1Q5U651 963 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 ANKRD33Q7Z3H0 272 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 SLC44A5Q8NCS7 719 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 SPATC1LQ9H0A9 340 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
CLN6-212ENST00000636020 PGK1P00558 417 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 TIMP1P01033 207 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 RARBP10826 455 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 BMP1P13497 986 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 C16orf59Q7L2K0 433 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 RNF180Q86T96 592 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 ABRAQ8N0Z2 381 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 MAML3Q96JK9 1138 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 HOXC10Q9NYD6 342 aa22.29■■□□□ 1.16
CLN6-212ENST00000636020 TCF20Q9UGU0 1960 aaKnown RBP22.29■■□□□ 1.16
CLN6-212ENST00000636020 IGFBP4P22692 258 aa22.28■■□□□ 1.16
CLN6-212ENST00000636020 COG2Q14746 738 aa22.28■■□□□ 1.16
CLN6-212ENST00000636020 TMEM240Q5SV17 173 aa22.28■■□□□ 1.16
CLN6-212ENST00000636020 CXXC1Q9P0U4 656 aaPredicted RBP22.28■■□□□ 1.16
CLN6-212ENST00000636020 NRBP1Q9UHY1 535 aa22.28■■□□□ 1.16
CLN6-212ENST00000636020 DCDC2CA8MYV0 355 aa22.27■■□□□ 1.16
CLN6-212ENST00000636020 UQCRFS1P1P0C7P4 283 aa22.27■■□□□ 1.16
CLN6-212ENST00000636020 TBX21Q9UL17 535 aa22.27■■□□□ 1.16
CLN6-212ENST00000636020 PIEZO1Q92508 2521 aa22.27■■□□□ 1.16
CLN6-212ENST00000636020 PPIGQ13427 754 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLN6-212ENST00000636020 ABCB5Q2M3G0 1257 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 CERKLQ49MI3 558 aaPredicted RBP22.26■■□□□ 1.15
CLN6-212ENST00000636020 MFSD5Q6N075 450 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 LRFN3Q9BTN0 628 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 MROH8Q9H579 483 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 SNRKQ9NRH2 765 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 SERPINB13Q9UIV8 391 aa22.26■■□□□ 1.15
CLN6-212ENST00000636020 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
CLN6-212ENST00000636020 CCDC174Q6PII3 467 aa22.25■■□□□ 1.15
CLN6-212ENST00000636020 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
CLN6-212ENST00000636020 EHD4Q9H223 541 aa22.25■■□□□ 1.15
CLN6-212ENST00000636020 HCN4Q9Y3Q4 1203 aa22.25■■□□□ 1.15
CLN6-212ENST00000636020 ZNF521Q96K83 1311 aa22.25■■□□□ 1.15
CLN6-212ENST00000636020 SRGAP3O43295 1099 aa22.24■■□□□ 1.15
CLN6-212ENST00000636020 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
CLN6-212ENST00000636020 MEIS3Q99687 375 aa22.24■■□□□ 1.15
CLN6-212ENST00000636020 ADAMTS4O75173 837 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 NCAPG2Q86XI2 1143 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 MB21D1Q8N884 522 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 TSPYL2Q9H2G4 693 aaPredicted RBP22.23■■□□□ 1.15
CLN6-212ENST00000636020 CABP5Q9NP86 173 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 STARD7Q9NQZ5 370 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 MSRAQ9UJ68 235 aa22.23■■□□□ 1.15
CLN6-212ENST00000636020 MYH1P12882 1939 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 ZNFX1Q9P2E3 1918 aaKnown RBP22.22■■□□□ 1.15
CLN6-212ENST00000636020 FCER1AP12319 257 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 TAL1P17542 331 aaPredicted RBP22.22■■□□□ 1.15
CLN6-212ENST00000636020 ACLYP53396 1101 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 MTX1Q13505 466 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 RAB30Q15771 203 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 ZNF365Q70YC5 407 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 NUP133Q8WUM0 1156 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 EPHX3Q9H6B9 360 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 ROBO3Q96MS0 1386 aa22.22■■□□□ 1.15
CLN6-212ENST00000636020 A0A0G2JMZ2 1700 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 A0A1W2PRG0 241 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 IGSF3O75054 1194 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 CYP2E1P05181 493 aaPredicted RBP22.21■■□□□ 1.15
CLN6-212ENST00000636020 ZNF865P0CJ78 1059 aaPredicted RBP22.21■■□□□ 1.15
CLN6-212ENST00000636020 PLS1Q14651 629 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 TINF2Q9BSI4 451 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 TANGO6Q9C0B7 1094 aa22.21■■□□□ 1.15
CLN6-212ENST00000636020 ACRP10323 421 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 CSF2RAP15509 400 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 DSG3P32926 999 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 SHMT1P34896 483 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 TFF2Q03403 129 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 SEPT2Q15019 361 aa22.2■■□□□ 1.14
CLN6-212ENST00000636020 LENG1Q96BZ8 264 aaPredicted RBP22.2■■□□□ 1.14
CLN6-212ENST00000636020 NKX2-4Q9H2Z4 354 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms