RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FAM53CQ9NYF3 392 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 RNF114Q9Y508 228 aa5.55□□□□□ -1.52
SRP54-214ENST00000630962 TNFRSF10CO14798 259 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 CLEC3AO75596 197 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 SRFP11831 508 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 TPP2P29144 1249 aaPredicted RBP5.54□□□□□ -1.52
SRP54-214ENST00000630962 GDNFP39905 211 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 OVOS1Q6IE37 1185 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 TSPYL5Q86VY4 417 aaPredicted RBP5.54□□□□□ -1.52
SRP54-214ENST00000630962 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
SRP54-214ENST00000630962 PRR13Q9NZ81 148 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 ZNRF3Q9ULT6 936 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 SLC12A7Q9Y666 1083 aa5.54□□□□□ -1.52
SRP54-214ENST00000630962 CNTNAP4Q9C0A0 1308 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 NME1P15531 152 aaKnown RBP5.53□□□□□ -1.52
SRP54-214ENST00000630962 CLCQ05315 142 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 ZNF394Q53GI3 561 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 RBBP8NLQ8NC74 664 aaPredicted RBP5.53□□□□□ -1.52
SRP54-214ENST00000630962 LRRN4CLQ8ND94 238 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 OR6P1Q8NGX9 317 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
SRP54-214ENST00000630962 Q96M66 194 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 CRBNQ96SW2 442 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 TGIF2Q9GZN2 237 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
SRP54-214ENST00000630962 CD96P40200 585 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 RBM10P98175 930 aaKnown RBP5.52□□□□□ -1.53
SRP54-214ENST00000630962 GAB4Q2WGN9 574 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 BBS9Q3SYG4 887 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 CREG2Q8IUH2 290 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 RASGRP4Q8TDF6 673 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 SYTL5Q8TDW5 730 aaPredicted RBP5.52□□□□□ -1.53
SRP54-214ENST00000630962 VWCEQ96DN2 955 aa5.52□□□□□ -1.53
SRP54-214ENST00000630962 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.52□□□□□ -1.53
SRP54-214ENST00000630962 DNAJA2O60884 412 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 UBOX5O94941 541 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 LTKP29376 864 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 DUSP4Q13115 394 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 NBPF12Q5TAG4 269 aaPredicted RBP5.51□□□□□ -1.53
SRP54-214ENST00000630962 METTL16Q86W50 562 aaKnown RBP5.51□□□□□ -1.53
SRP54-214ENST00000630962 ZSWIM9Q86XI8 627 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 NT5DC4Q86YG4 428 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 SPPL2CQ8IUH8 684 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 OXR1Q8N573 874 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 ZNF655Q8N720 491 aaPredicted RBP5.51□□□□□ -1.53
SRP54-214ENST00000630962 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 GPRASP2Q96D09 838 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 SEC16BQ96JE7 1060 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 TMEM59LQ9UK28 342 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 ADAMTS6Q9UKP5 1117 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 STRIP2Q9ULQ0 834 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 CTNND2Q9UQB3 1225 aa5.51□□□□□ -1.53
SRP54-214ENST00000630962 SSU72P8A0A1W2PR75 194 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 PAPLNO95428 1278 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 RACK1P63244 317 aaKnown RBP5.5□□□□□ -1.53
SRP54-214ENST00000630962 CHRNEQ04844 493 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 PAK2Q13177 524 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 NMIQ13287 307 aaPredicted RBP5.5□□□□□ -1.53
SRP54-214ENST00000630962 GNL2Q13823 731 aaKnown RBP5.5□□□□□ -1.53
SRP54-214ENST00000630962 KCNMB1Q16558 191 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 VPS37DQ86XT2 251 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 LILRA2Q8N149 483 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 FAM168AQ92567 244 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 SLAMF8Q9P0V8 285 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 PCDHGB7Q9Y5F8 929 aa5.5□□□□□ -1.53
SRP54-214ENST00000630962 ESR1P03372 595 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 GJA8P48165 433 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 SOX9P48436 509 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 PCBP3P57721 371 aaKnown RBP5.49□□□□□ -1.53
SRP54-214ENST00000630962 HDLBPQ00341 1268 aaKnown RBP5.49□□□□□ -1.53
SRP54-214ENST00000630962 EGR3Q06889 387 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 NBPF9Q3BBW0 867 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 FBXW10Q5XX13 1052 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 PDZD8Q8NEN9 1154 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 KIRREL1Q96J84 757 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 KIAA1522Q9P206 1035 aaPredicted RBP5.49□□□□□ -1.53
SRP54-214ENST00000630962 SUCOQ9UBS9 1254 aaKnown RBP5.49□□□□□ -1.53
SRP54-214ENST00000630962 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
SRP54-214ENST00000630962 FITM1A5D6W6 292 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 SIGLEC6O43699 453 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 GUCY2CP25092 1073 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 EIF6P56537 245 aaKnown RBP5.48□□□□□ -1.53
SRP54-214ENST00000630962 TMEM67Q5HYA8 995 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 TTC6Q86TZ1 520 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 C19orf47Q8N9M1 422 aaKnown RBP5.48□□□□□ -1.53
SRP54-214ENST00000630962 SLC6A18Q96N87 628 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 MKRN2Q9H000 416 aaKnown RBP5.48□□□□□ -1.53
SRP54-214ENST00000630962 PRDM7Q9NQW5 492 aa5.48□□□□□ -1.53
SRP54-214ENST00000630962 HPXP02790 462 aa5.47□□□□□ -1.53
SRP54-214ENST00000630962 GLI1P08151 1106 aa5.47□□□□□ -1.53
SRP54-214ENST00000630962 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
SRP54-214ENST00000630962 SNX17Q15036 470 aa5.47□□□□□ -1.53
SRP54-214ENST00000630962 NR0B2Q15466 257 aa5.47□□□□□ -1.53
SRP54-214ENST00000630962 ANKRD39Q53RE8 183 aa5.47□□□□□ -1.53
SRP54-214ENST00000630962 POU5F2Q8N7G0 328 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms