RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 TREML2Q5T2D2 321 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 TBC1D32Q96NH3 1257 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
TRIO-224ENST00000620511 KIF2CQ99661 725 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
TRIO-224ENST00000620511 MANSC4A6NHS7 340 aaPredicted RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 CETPP11597 493 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 TRDNQ13061 729 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 LRRC47Q8N1G4 583 aaKnown RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 TTC14Q96N46 770 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 VCPKMTQ9H867 229 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 STX8Q9UNK0 236 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 TNKSO95271 1327 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 PRC1O43663 620 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ANAPC15P60006 121 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 BECN1Q14457 450 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 KRT32Q14532 448 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 JMYQ8N9B5 988 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 PROCA1Q8NCQ7 364 aaPredicted RBP11.3□□□□□ -0.6
TRIO-224ENST00000620511 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 SYNPO2Q9UMS6 1093 aa11.3□□□□□ -0.6
TRIO-224ENST00000620511 F5H6K3 240 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
TRIO-224ENST00000620511 NDUFB10O96000 172 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
TRIO-224ENST00000620511 VCAM1P19320 739 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 MCM5P33992 734 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 RBM25P49756 843 aaKnown RBP11.29□□□□□ -0.6
TRIO-224ENST00000620511 INHBEP58166 350 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 KLRC3Q07444 240 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
TRIO-224ENST00000620511 IQCA1Q86XH1 822 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 GMCL1P1Q8NEA9 526 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 AGTPBP1Q9UPW5 1226 aa11.29□□□□□ -0.6
TRIO-224ENST00000620511 SMCHD1A6NHR9 2005 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 IFIT3O14879 490 aaKnown RBP11.28□□□□□ -0.6
TRIO-224ENST00000620511 RPS6KB1P23443 525 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
TRIO-224ENST00000620511 USP14P54578 494 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
TRIO-224ENST00000620511 ANKRD23Q86SG2 305 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 FBXL16Q8N461 479 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 FEZ1Q99689 392 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 UBAC1Q9BSL1 405 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
TRIO-224ENST00000620511 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
TRIO-224ENST00000620511 COL11A1P12107 1806 aaPredicted RBP11.27□□□□□ -0.6
TRIO-224ENST00000620511 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.6
TRIO-224ENST00000620511 ADGRA2Q96PE1 1338 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 PDHXO00330 501 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
TRIO-224ENST00000620511 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
TRIO-224ENST00000620511 MCCP23508 829 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 TMEM67Q5HYA8 995 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
TRIO-224ENST00000620511 LPAR1Q92633 364 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 NUP88Q99567 741 aaPredicted RBP11.27□□□□□ -0.61
TRIO-224ENST00000620511 RPAP3Q9H6T3 665 aaPredicted RBP11.27□□□□□ -0.61
TRIO-224ENST00000620511 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 RNF186Q9NXI6 227 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 SLC45A1Q9Y2W3 748 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 HTTP42858 3142 aa11.27□□□□□ -0.61
TRIO-224ENST00000620511 CENPFP49454 3210 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 PDHBP11177 359 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 LIFRP42702 1097 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 TROAPQ12815 778 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 TOB2Q14106 344 aaPredicted RBP11.26□□□□□ -0.61
TRIO-224ENST00000620511 CCDC178Q5BJE1 867 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
TRIO-224ENST00000620511 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms