RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 PLEKHH3Q7Z736 793 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 NACAP1Q9BZK3 213 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 KANSL2Q9H9L4 492 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 TMX2Q9Y320 296 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 SALL3Q9BXA9 1300 aa20.19■□□□□ 0.82
LTBP4-235ENST00000617753 CNMDO75829 334 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 COG2Q14746 738 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 SPICE1Q8N0Z3 855 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 DEFB118Q96PH6 123 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 SEC62Q99442 399 aaKnown RBP20.18■□□□□ 0.82
LTBP4-235ENST00000617753 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
LTBP4-235ENST00000617753 VCPKMTQ9H867 229 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
LTBP4-235ENST00000617753 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 PLXNB2O15031 1838 aa20.18■□□□□ 0.82
LTBP4-235ENST00000617753 SGPL1O95470 568 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 EEF2P13639 858 aaKnown RBP20.17■□□□□ 0.82
LTBP4-235ENST00000617753 RGS2P41220 211 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 PDE1AP54750 535 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 ZMYM1Q5SVZ6 1142 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
LTBP4-235ENST00000617753 PATL2C9JE40 543 aaKnown RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 WDR46O15213 610 aaKnown RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 RAD21O60216 631 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 FLOT1O75955 427 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 KIAA1755Q5JYT7 1200 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 TRMT44Q8IYL2 757 aaKnown RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 IFNL3Q8IZI9 196 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 TRIB2Q92519 343 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 EVI5LQ96CN4 794 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 LNPKQ9C0E8 428 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 GOPCQ9HD26 462 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 PAK6Q9NQU5 681 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-235ENST00000617753 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 IVNS1ABPQ9Y6Y0 642 aa20.16■□□□□ 0.82
LTBP4-235ENST00000617753 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
LTBP4-235ENST00000617753 TFRCP02786 760 aaKnown RBP20.15■□□□□ 0.82
LTBP4-235ENST00000617753 RASA1P20936 1047 aa20.15■□□□□ 0.82
LTBP4-235ENST00000617753 MORN1Q5T089 497 aa20.15■□□□□ 0.82
LTBP4-235ENST00000617753 SAMD1Q6SPF0 538 aaPredicted RBP20.15■□□□□ 0.82
LTBP4-235ENST00000617753 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
LTBP4-235ENST00000617753 APBA2Q99767 749 aa20.15■□□□□ 0.82
LTBP4-235ENST00000617753 NAPBQ9H115 298 aa20.15■□□□□ 0.82
LTBP4-235ENST00000617753 HMX1Q9NP08 348 aaPredicted RBP20.15■□□□□ 0.82
LTBP4-235ENST00000617753 RPTORQ8N122 1335 aa20.14■□□□□ 0.81
LTBP4-235ENST00000617753 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
LTBP4-235ENST00000617753 CAPN2P17655 700 aa20.14■□□□□ 0.81
LTBP4-235ENST00000617753 TRIM32Q13049 653 aa20.14■□□□□ 0.81
LTBP4-235ENST00000617753 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
LTBP4-235ENST00000617753 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
LTBP4-235ENST00000617753 MB21D1Q8N884 522 aa20.14■□□□□ 0.81
LTBP4-235ENST00000617753 PRKAR2AP13861 404 aaKnown RBP20.13■□□□□ 0.81
LTBP4-235ENST00000617753 DSG3P32926 999 aa20.13■□□□□ 0.81
LTBP4-235ENST00000617753 MAP2K5Q13163 448 aa20.13■□□□□ 0.81
LTBP4-235ENST00000617753 SMC5Q8IY18 1101 aa20.13■□□□□ 0.81
LTBP4-235ENST00000617753 USP6NLQ92738 828 aa20.13■□□□□ 0.81
LTBP4-235ENST00000617753 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.13■□□□□ 0.81
LTBP4-235ENST00000617753 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
LTBP4-235ENST00000617753 SLC15A5A6NIM6 579 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 PRDM1O75626 825 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 PTPREP23469 700 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 PDE4BQ07343 736 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 PLS1Q14651 629 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 ATG4CQ96DT6 458 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 HTATIP2Q9BUP3 242 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 MOV10L1Q9BXT6 1211 aaKnown RBP20.12■□□□□ 0.81
LTBP4-235ENST00000617753 SPATC1LQ9H0A9 340 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 A0A0G2JMZ2 1700 aa20.12■□□□□ 0.81
LTBP4-235ENST00000617753 PPARAQ07869 468 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 CCL14Q16627 93 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 CCDC129Q6ZRS4 1044 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 UBE2Q1Q7Z7E8 422 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 DPF3Q92784 378 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 CRISPLD2Q9H0B8 497 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 RLFQ13129 1914 aa20.11■□□□□ 0.81
LTBP4-235ENST00000617753 TRIM6-TRIM34B2RNG4 842 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 GRB14Q14449 540 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 FAM83BQ5T0W9 1011 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 SHCBP1Q8NEM2 672 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 NYAP2Q9P242 653 aa20.1■□□□□ 0.81
LTBP4-235ENST00000617753 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
LTBP4-235ENST00000617753 TSPY3P0CV98 308 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 TSPY8P0CW00 308 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 ERCC3P19447 782 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 MFSD14CQ5VZR4 134 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 HELLSQ9NRZ9 838 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 FBXO28Q9NVF7 368 aa20.09■□□□□ 0.81
LTBP4-235ENST00000617753 STRNO43815 780 aa20.08■□□□□ 0.81
LTBP4-235ENST00000617753 IGHDP01880 384 aa20.08■□□□□ 0.81
LTBP4-235ENST00000617753 CACNB2Q08289 660 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms