RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GPR62Q9BZJ7 368 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 TRIT1Q9H3H1 467 aaKnown RBP8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 PPT2Q9UMR5 302 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 EFR3BQ9Y2G0 817 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 POLR2BP30876 1174 aaKnown RBP8.32□□□□□ -1.08
SCAMP1-205ENST00000614488 CBLL1Q75N03 491 aa8.32□□□□□ -1.08
SCAMP1-205ENST00000614488 SEC16BQ96JE7 1060 aa8.32□□□□□ -1.08
SCAMP1-205ENST00000614488 TM9SF2Q99805 663 aa8.32□□□□□ -1.08
SCAMP1-205ENST00000614488 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
SCAMP1-205ENST00000614488 E9PSI1 815 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 SRFP11831 508 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 TMPRSS7Q7RTY8 843 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 ATP13A1Q9HD20 1204 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 IGSF5Q9NSI5 407 aa8.31□□□□□ -1.08
SCAMP1-205ENST00000614488 CLEC3AO75596 197 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 ZP2Q05996 745 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 ZNF792Q3KQV3 632 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 NBPF12Q5TAG4 269 aaPredicted RBP8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 LSRQ86X29 649 aaPredicted RBP8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 SLC9A7Q96T83 725 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 ZSWIM5Q9P217 1185 aa8.3□□□□□ -1.08
SCAMP1-205ENST00000614488 LRRN2O75325 713 aa8.29□□□□□ -1.08
SCAMP1-205ENST00000614488 OR6P1Q8NGX9 317 aa8.29□□□□□ -1.08
SCAMP1-205ENST00000614488 PI4K2BQ8TCG2 481 aa8.29□□□□□ -1.08
SCAMP1-205ENST00000614488 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
SCAMP1-205ENST00000614488 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 ACRP10323 421 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 GUCY2CP25092 1073 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 GAB4Q2WGN9 574 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 CCDC81Q6ZN84 652 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 TSPYL5Q86VY4 417 aaPredicted RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 DHRS1Q96LJ7 313 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 SRRTQ9BXP5 876 aaKnown RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 CARS2Q9HA77 564 aaKnown RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 MBNL3Q9NUK0 354 aaKnown RBP8.28□□□□□ -1.08
SCAMP1-205ENST00000614488 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 TPP2P29144 1249 aaPredicted RBP8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 GIPRP48546 466 aa8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 EIF6P56537 245 aaKnown RBP8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.09
SCAMP1-205ENST00000614488 GNL2Q13823 731 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 C19orf47Q8N9M1 422 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 ASCC2Q9H1I8 757 aaPredicted RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 RC3H2Q9HBD1 1191 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 CAPN10Q9HC96 672 aa8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 SUCOQ9UBS9 1254 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-205ENST00000614488 ESR1P03372 595 aa8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 ATF4P18848 351 aaPredicted RBP8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 SMARCC1Q92922 1105 aaPredicted RBP8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 SHDQ96IW2 340 aa8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 DUSP13Q9UII6 198 aa8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 SLC12A7Q9Y666 1083 aa8.25□□□□□ -1.09
SCAMP1-205ENST00000614488 SHISA3A0PJX4 238 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 ITGB5P18084 799 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 PMS1P54277 932 aaKnown RBP8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 CLEC16AQ2KHT3 1053 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 RUFY4Q6ZNE9 571 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 VPS37DQ86XT2 251 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 LRRN4CLQ8ND94 238 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 SYTL5Q8TDW5 730 aaPredicted RBP8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 CCDC120Q96HB5 630 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
SCAMP1-205ENST00000614488 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 TAL1P17542 331 aaPredicted RBP8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 ATG4DQ86TL0 474 aaPredicted RBP8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 CREG2Q8IUH2 290 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 CPLX3Q8WVH0 158 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 PRDM7Q9NQW5 492 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
SCAMP1-205ENST00000614488 JUNBP17275 347 aaPredicted RBP8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 BBS9Q3SYG4 887 aa8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 DAGLBQ8NCG7 672 aa8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 FLAD1Q8NFF5 587 aa8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 ALPK1Q96QP1 1244 aa8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
SCAMP1-205ENST00000614488 FAM86C2PA6NEL3 165 aa8.21□□□□□ -1.1
SCAMP1-205ENST00000614488 BIN1O00499 593 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms