RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NEO1Q92859 1461 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 CRB1P82279 1406 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 MTRF1LQ9UGC7 380 aaKnown RBP16.31■□□□□ 0.2
VPS36-207ENST00000611132 MFAP3LO75121 409 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 LPIN2Q92539 896 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
VPS36-207ENST00000611132 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
VPS36-207ENST00000611132 PPARDQ03181 441 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
VPS36-207ENST00000611132 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 APBA1Q02410 837 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 E2F4Q16254 413 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 CEP104O60308 925 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
VPS36-207ENST00000611132 ST5P78524 1137 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 PLVAPQ9BX97 442 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
VPS36-207ENST00000611132 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 COBLO75128 1261 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
VPS36-207ENST00000611132 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
VPS36-207ENST00000611132 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
VPS36-207ENST00000611132 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 NDUFA10O95299 355 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 PTGDRQ13258 359 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 TADA2BQ86TJ2 420 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
VPS36-207ENST00000611132 MMP1P03956 469 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 SRLQ86TD4 932 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 DPF2Q92785 391 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 ADORA1P30542 326 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 KRT71Q3SY84 523 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 MMS22LQ6ZRQ5 1243 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 PUS3Q9BZE2 481 aaKnown RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 H2AFXP16104 143 aaPredicted RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 IFNAR1P17181 557 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 EPHB4P54760 987 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 MTMR3Q13615 1198 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 LACTBP83111 547 aaPredicted RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 STXBP4Q6ZWJ1 553 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 RRP36Q96EU6 259 aaKnown RBP16.28■□□□□ 0.2
VPS36-207ENST00000611132 CCDC77Q9BR77 488 aa16.28■□□□□ 0.2
VPS36-207ENST00000611132 BUB1BO60566 1050 aaPredicted RBP16.27■□□□□ 0.2
VPS36-207ENST00000611132 CIAO1O76071 339 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 NR5A1Q13285 461 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
VPS36-207ENST00000611132 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
VPS36-207ENST00000611132 UTP11Q9Y3A2 253 aaKnown RBP16.27■□□□□ 0.2
VPS36-207ENST00000611132 CCDC6Q16204 474 aa16.27■□□□□ 0.19
VPS36-207ENST00000611132 HOOK3Q86VS8 718 aa16.27■□□□□ 0.19
VPS36-207ENST00000611132 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.19
VPS36-207ENST00000611132 CACNA2D3Q8IZS8 1091 aa16.27■□□□□ 0.19
VPS36-207ENST00000611132 BAIAP2L1Q9UHR4 511 aa16.27■□□□□ 0.19
VPS36-207ENST00000611132 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 ASIC2Q16515 512 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 CABLES1Q8TDN4 633 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 IFT74Q96LB3 600 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 NLRC4Q9NPP4 1024 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 ERCC3P19447 782 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 CABP7Q86V35 215 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 FBF1Q8TES7 1133 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PAIP2Q9BPZ3 127 aaKnown RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 FEZ2Q9UHY8 353 aaPredicted RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 PTPREP23469 700 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 TNNI2P48788 182 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PPARAQ07869 468 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 NAP1L3Q99457 506 aaPredicted RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
VPS36-207ENST00000611132 TNKSO95271 1327 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PDE8AO60658 829 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms