RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 LRCH2Q5VUJ6 765 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 KRT26Q7Z3Y9 468 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 ANKRD18AQ8IVF6 992 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 FMNL3Q8IVF7 1028 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 ITPRIPQ8IWB1 547 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 CERS5Q8N5B7 392 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 TDRD7Q8NHU6 1098 aaKnown RBP5.84□□□□□ -1.47
SSX9-202ENST00000608568 DPF2Q92785 391 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 AIDAQ96BJ3 306 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 DDX11Q96FC9 970 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 CDCA5Q96FF9 252 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 ZNF594Q96JF6 807 aaPredicted RBP5.84□□□□□ -1.47
SSX9-202ENST00000608568 C16orf45Q96MC5 204 aaPredicted RBP5.84□□□□□ -1.47
SSX9-202ENST00000608568 NBPF3Q9H094 633 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 VRTNQ9H8Y1 702 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 ANKIB1Q9P2G1 1089 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 IMPACTQ9P2X3 320 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 FZD1Q9UP38 647 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 JAG2Q9Y219 1238 aa5.84□□□□□ -1.47
SSX9-202ENST00000608568 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
SSX9-202ENST00000608568 BAZ2AQ9UIF9 1905 aaKnown RBP5.84□□□□□ -1.48
SSX9-202ENST00000608568 NAV1Q8NEY1 1877 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 LOC285556D6RIA3 1793 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 ATXN2Q99700 1313 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 H7C1D1 291 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 ERC2O15083 957 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 EIF3JO75822 258 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 DDX58O95786 925 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 CD46P15529 392 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 ITGA6P23229 1130 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 RPS12P25398 132 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 CCT4P50991 539 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 ZNF75DP51815 510 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 HUNKP57058 714 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 FOXO4P98177 505 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 ELF2Q15723 593 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 C6orf132Q5T0Z8 1188 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 TTLL5Q6EMB2 1281 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 RASAL3Q86YV0 1011 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 GPR161Q8N6U8 529 aaKnown RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 HELBQ8NG08 1087 aaPredicted RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 ADAMTS19Q8TE59 1207 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 DNAAF4Q8WXU2 420 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 UBXN4Q92575 508 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 ABHD8Q96I13 439 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 KAZALD1Q96I82 304 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 EYA3Q99504 573 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 PLA2G12BQ9BX93 195 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 PPP1R12CQ9BZL4 782 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 TMX4Q9H1E5 349 aaPredicted RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 ACBD3Q9H3P7 528 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 GBA2Q9HCG7 927 aaPredicted RBP5.83□□□□□ -1.48
SSX9-202ENST00000608568 NDUFB9Q9Y6M9 179 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 IVNS1ABPQ9Y6Y0 642 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 PARP14Q460N5 1801 aa5.83□□□□□ -1.48
SSX9-202ENST00000608568 TTC41PQ6P2S7 1318 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 LAMA3Q16787 3333 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 CCDC189A1A4V9 331 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 USP17L3A6NCW0 530 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 USP17L4A6NCW7 530 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 GOLGA6L9A6NEM1 432 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 EIF3CLB5ME19 914 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 TAF5LO75529 589 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SMC2O95347 1197 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 CSF1RP07333 972 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SLC10A3P09131 477 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 PTGS1P23219 599 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 CHRNDQ07001 517 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 TUBB2AQ13885 445 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SCARF1Q14162 830 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SMC1AQ14683 1233 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 BRD3Q15059 726 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 MAP3K11Q16584 847 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 QPCTQ16769 361 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 BEND3Q5T5X7 828 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 RBM43Q6ZSC3 357 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 SND1Q7KZF4 910 aaKnown RBP eCLIP5.82□□□□□ -1.48
SSX9-202ENST00000608568 CDC37L1Q7L3B6 337 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 USP17L1Q7RTZ2 530 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 CCDC186Q7Z3E2 898 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 FCHSD1Q86WN1 690 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 LRRC8AQ8IWT6 810 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 C17orf53Q8N3J3 647 aaPredicted RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 GPATCH11Q8N954 259 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 HNRNPLLQ8WVV9 542 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 ITFG2Q969R8 447 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 SUCLG2Q96I99 432 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 ZBED3Q96IU2 234 aaPredicted RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 TMX3Q96JJ7 454 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 EIF3CQ99613 913 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 TUBB2BQ9BVA1 445 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 STK31Q9BXU1 1019 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 ZC3H12CQ9C0D7 883 aaKnown RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
SSX9-202ENST00000608568 ZSCAN16Q9H4T2 348 aaPredicted RBP5.82□□□□□ -1.48
SSX9-202ENST00000608568 MYOZ2Q9NPC6 264 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms