RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ZNF333Q96JL9 665 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
PRDM16-210ENST00000607632 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 NYAP2Q9P242 653 aa17.08■□□□□ 0.32
PRDM16-210ENST00000607632 HIP1O00291 1037 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 CNMDO75829 334 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
PRDM16-210ENST00000607632 MLLT1Q03111 559 aaPredicted RBP17.07■□□□□ 0.32
PRDM16-210ENST00000607632 PRKCZQ05513 592 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
PRDM16-210ENST00000607632 SPDYE16A6NNV3 312 aaPredicted RBP17.06■□□□□ 0.32
PRDM16-210ENST00000607632 WDR46O15213 610 aaKnown RBP17.06■□□□□ 0.32
PRDM16-210ENST00000607632 FGAP02671 866 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 ERVK-24P63145 666 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 PDE4BQ07343 736 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 MKL1Q969V6 931 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 GABRQQ9UN88 632 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
PRDM16-210ENST00000607632 TNPO2O14787 897 aaKnown RBP17.05■□□□□ 0.32
PRDM16-210ENST00000607632 SLC3A2P08195 630 aaKnown RBP17.05■□□□□ 0.32
PRDM16-210ENST00000607632 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
PRDM16-210ENST00000607632 Q3C1V9 767 aa17.05■□□□□ 0.32
PRDM16-210ENST00000607632 SLC9C1Q4G0N8 1177 aa17.05■□□□□ 0.32
PRDM16-210ENST00000607632 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-210ENST00000607632 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
PRDM16-210ENST00000607632 TNRC18O15417 2968 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-210ENST00000607632 ORC4O43929 436 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 PRDM1O75626 825 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 NOVP48745 357 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 FLT3LGP49771 235 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 SOX10P56693 466 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 COG2Q14746 738 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 NBPF11Q86T75 865 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 PXYLP1Q8TE99 480 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 COA7Q96BR5 231 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
PRDM16-210ENST00000607632 BRCA2P51587 3418 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 PEX10O60683 326 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 GRK4P32298 578 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 DSG3P32926 999 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 SLAIN1Q8ND83 568 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 CEP95Q96GE4 821 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 HOXC10Q9NYD6 342 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 BTBD7Q9P203 1132 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 ADAMTS5Q9UNA0 930 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 ZNF236Q9UL36 1845 aa17.03■□□□□ 0.32
PRDM16-210ENST00000607632 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
PRDM16-210ENST00000607632 MAPK4P31152 587 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 CTDSPL2Q05D32 466 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
PRDM16-210ENST00000607632 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 USP6NLQ92738 828 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 DSCC1Q9BVC3 393 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 NBPF3Q9H094 633 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 PORCNQ9H237 461 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 GOPCQ9HD26 462 aa17.02■□□□□ 0.32
PRDM16-210ENST00000607632 KIAA0100Q14667 2235 aaKnown RBP17.01■□□□□ 0.31
PRDM16-210ENST00000607632 RAD50Q92878 1312 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 F5H6K3 240 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 TTLL1O95922 423 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
PRDM16-210ENST00000607632 TFAP4Q01664 338 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 KLRC3Q07444 240 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
PRDM16-210ENST00000607632 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 MB21D1Q8N884 522 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 IL25Q9H293 177 aa17.01■□□□□ 0.31
PRDM16-210ENST00000607632 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
PRDM16-210ENST00000607632 POTEFA5A3E0 1075 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 ADCY3O60266 1144 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 NDUFB10O96000 172 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 NT5C2P49902 561 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 CCNA1P78396 465 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 ATP2B2Q01814 1243 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 PPP4R3BQ5MIZ7 849 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 MORN1Q5T089 497 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 GPR142Q7Z601 462 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 STAG1Q8WVM7 1258 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 INCENPQ9NQS7 918 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 CLIP2Q9UDT6 1046 aa17■□□□□ 0.31
PRDM16-210ENST00000607632 FLOT1O75955 427 aa16.99■□□□□ 0.31
PRDM16-210ENST00000607632 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
PRDM16-210ENST00000607632 SHCBP1Q8NEM2 672 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms