RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 RASA3Q14644 834 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 ZSCAN26Q16670 478 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 GLYCTKQ8IVS8 523 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 FAM184AQ8NB25 1140 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 UBXN4Q92575 508 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 MISP3Q96FF7 219 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 ZNF396Q96N95 335 aaPredicted RBP6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 DNAJC25Q9H1X3 360 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 DEF6Q9H4E7 631 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 LGR6Q9HBX8 967 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 CWC15Q9P013 229 aaKnown RBP6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 NRBP1Q9UHY1 535 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 SUFUQ9UMX1 484 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 EEA1Q15075 1411 aa6.93□□□□□ -1.3
LSM1P2-201ENST00000604911 TMEM238LA0A1B0GVL6 79 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 NDUFB5O43674 189 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 ZNF862O60290 1169 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 PSMD2Q13200 908 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 KIF4BQ2VIQ3 1234 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 ZNF792Q3KQV3 632 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 ZNF662Q6ZS27 426 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 IQCF2Q8IXL9 164 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 RMDN2Q96LZ7 410 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 FANCD2OSQ96PS1 177 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 CXorf56Q9H5V9 222 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 RETREG1Q9H6L5 497 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 DISC1Q9NRI5 854 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 CTDP1Q9Y5B0 961 aaPredicted RBP6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 CARMIL2Q6F5E8 1435 aa6.92□□□□□ -1.3
LSM1P2-201ENST00000604911 TMCO5BA8MYB1 307 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 GPR182O15218 404 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 TIMM44O43615 452 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 HTATSF1O43719 755 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 HSP90AB1P08238 724 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 CCDC175P0C221 793 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 KCNA2P16389 499 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 IRX1P78414 480 aaPredicted RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 ID3Q02535 119 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 CDK5R2Q13319 367 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 C11orf96Q7Z7L8 435 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 PCGF5Q86SE9 256 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 C1orf131Q8NDD1 294 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 SMCR8Q8TEV9 937 aaPredicted RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 RSPH1Q8WYR4 309 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 SYAP1Q96A49 352 aaPredicted RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 IQCGQ9H095 443 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 ATXN3LQ9H3M9 355 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 KRT82Q9NSB4 513 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 KLHL42Q9P2K6 505 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 ODF2LQ9ULJ1 636 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 THRAP3Q9Y2W1 955 aaKnown RBP6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 U3KQE9 123 aa6.91□□□□□ -1.3
LSM1P2-201ENST00000604911 SCRIBQ14160 1630 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 FAM87AP0C7U9 286 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 SKILP12757 684 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 FUT4P22083 530 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 GSCP56915 257 aaPredicted RBP6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 BNIP3Q12983 259 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 TRAF1Q13077 416 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 TMED1Q13445 227 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 GRM2Q14416 872 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 B4GALNT3Q6L9W6 998 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 PDZD3Q86UT5 571 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 CCAR1Q8IX12 1150 aaKnown RBP6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 PDILTQ8N807 584 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 VPS37AQ8NEZ2 397 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 NETO1Q8TDF5 533 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 C17orf50Q8WW18 174 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 TEKT1Q969V4 418 aa6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 NOL10Q9BSC4 688 aaKnown RBP6.9□□□□□ -1.3
LSM1P2-201ENST00000604911 FSD2A1L4K1 749 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 GSTP1P09211 210 aaKnown RBP6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 SLFN14P0C7P3 912 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 CD8BP10966 210 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 DCTN1Q14203 1278 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 GIMAP6Q6P9H5 292 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 C16orf87Q6PH81 154 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 ZSCAN30Q86W11 494 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 FAM181AQ8N9Y4 354 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 KIF2CQ99661 725 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 FEZ1Q99689 392 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 MMTAG2Q9BU76 263 aaKnown RBP6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 INO80BQ9C086 356 aaPredicted RBP6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
LSM1P2-201ENST00000604911 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms