RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 COA7Q96BR5 231 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
TUBE1-208ENST00000604743 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
TUBE1-208ENST00000604743 CENPFP49454 3210 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 TSPY3P0CV98 308 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 TSPY8P0CW00 308 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
TUBE1-208ENST00000604743 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
TUBE1-208ENST00000604743 Q3C1V9 767 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
TUBE1-208ENST00000604743 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 MORF4L1Q9UBU8 362 aa17.14■□□□□ 0.33
TUBE1-208ENST00000604743 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
TUBE1-208ENST00000604743 HIP1O00291 1037 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 FGAP02671 866 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 FLT3LGP49771 235 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
TUBE1-208ENST00000604743 ERVK-9P63128 1117 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 ERVK-24P63145 666 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
TUBE1-208ENST00000604743 ARMC5Q96C12 935 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
TUBE1-208ENST00000604743 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
TUBE1-208ENST00000604743 RLFQ13129 1914 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
TUBE1-208ENST00000604743 GRK4P32298 578 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 HAND2P61296 217 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 TFAP4Q01664 338 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 ALX1Q15699 326 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 LPAR1Q92633 364 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
TUBE1-208ENST00000604743 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
TUBE1-208ENST00000604743 CNMDO75829 334 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 FLOT1O75955 427 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 COG2Q14746 738 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
TUBE1-208ENST00000604743 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 CEP95Q96GE4 821 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
TUBE1-208ENST00000604743 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
TUBE1-208ENST00000604743 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 WDR46O15213 610 aaKnown RBP17.1■□□□□ 0.33
TUBE1-208ENST00000604743 ADCY3O60266 1144 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
TUBE1-208ENST00000604743 ELNP15502 786 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 NEDD1Q8NHV4 660 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 TMEM106CQ9BVX2 250 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 PORCNQ9H237 461 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 BTBD7Q9P203 1132 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
TUBE1-208ENST00000604743 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
TUBE1-208ENST00000604743 POTEFA5A3E0 1075 aa17.09■□□□□ 0.33
TUBE1-208ENST00000604743 DSG3P32926 999 aa17.09■□□□□ 0.33
TUBE1-208ENST00000604743 RGS19P49795 217 aa17.09■□□□□ 0.33
TUBE1-208ENST00000604743 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-208ENST00000604743 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
TUBE1-208ENST00000604743 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
TUBE1-208ENST00000604743 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-208ENST00000604743 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
TUBE1-208ENST00000604743 F5H6K3 240 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 TTLL1O95922 423 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 CYP2B6P20813 491 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 MAPK4P31152 587 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 CCNA1P78396 465 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 KLRC3Q07444 240 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 PLS1Q14651 629 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 MTFR1Q15390 333 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
TUBE1-208ENST00000604743 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 ATG4CQ96DT6 458 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 FBXO28Q9NVF7 368 aa17.08■□□□□ 0.32
TUBE1-208ENST00000604743 ISY1Q9ULR0 285 aaKnown RBP17.08■□□□□ 0.32
TUBE1-208ENST00000604743 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 NMT2O60551 498 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 NDUFB10O96000 172 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 UBXN2AP68543 259 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 IRF5Q13568 498 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 IL25Q9H293 177 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 GJD2Q9UKL4 321 aa17.07■□□□□ 0.32
TUBE1-208ENST00000604743 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms