RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 COA7Q96BR5 231 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
TUBE1-204ENST00000603621 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
TUBE1-204ENST00000603621 CENPFP49454 3210 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 TSPY3P0CV98 308 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 TSPY8P0CW00 308 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
TUBE1-204ENST00000603621 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
TUBE1-204ENST00000603621 Q3C1V9 767 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
TUBE1-204ENST00000603621 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 MORF4L1Q9UBU8 362 aa17.14■□□□□ 0.33
TUBE1-204ENST00000603621 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
TUBE1-204ENST00000603621 HIP1O00291 1037 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 FGAP02671 866 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 FLT3LGP49771 235 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
TUBE1-204ENST00000603621 ERVK-9P63128 1117 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 ERVK-24P63145 666 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
TUBE1-204ENST00000603621 ARMC5Q96C12 935 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
TUBE1-204ENST00000603621 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
TUBE1-204ENST00000603621 RLFQ13129 1914 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
TUBE1-204ENST00000603621 GRK4P32298 578 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 HAND2P61296 217 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 TFAP4Q01664 338 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 ALX1Q15699 326 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 LPAR1Q92633 364 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
TUBE1-204ENST00000603621 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
TUBE1-204ENST00000603621 CNMDO75829 334 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 FLOT1O75955 427 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 COG2Q14746 738 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
TUBE1-204ENST00000603621 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 CEP95Q96GE4 821 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 NYAP2Q9P242 653 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
TUBE1-204ENST00000603621 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
TUBE1-204ENST00000603621 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 WDR46O15213 610 aaKnown RBP17.1■□□□□ 0.33
TUBE1-204ENST00000603621 ADCY3O60266 1144 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
TUBE1-204ENST00000603621 ELNP15502 786 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 NEDD1Q8NHV4 660 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 TMEM106CQ9BVX2 250 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 PORCNQ9H237 461 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 BTBD7Q9P203 1132 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
TUBE1-204ENST00000603621 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
TUBE1-204ENST00000603621 POTEFA5A3E0 1075 aa17.09■□□□□ 0.33
TUBE1-204ENST00000603621 DSG3P32926 999 aa17.09■□□□□ 0.33
TUBE1-204ENST00000603621 RGS19P49795 217 aa17.09■□□□□ 0.33
TUBE1-204ENST00000603621 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-204ENST00000603621 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
TUBE1-204ENST00000603621 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
TUBE1-204ENST00000603621 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-204ENST00000603621 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
TUBE1-204ENST00000603621 F5H6K3 240 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 TTLL1O95922 423 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 CYP2B6P20813 491 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 MAPK4P31152 587 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 CCNA1P78396 465 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 KLRC3Q07444 240 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 PLS1Q14651 629 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 MTFR1Q15390 333 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
TUBE1-204ENST00000603621 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 ATG4CQ96DT6 458 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 FBXO28Q9NVF7 368 aa17.08■□□□□ 0.32
TUBE1-204ENST00000603621 ISY1Q9ULR0 285 aaKnown RBP17.08■□□□□ 0.32
TUBE1-204ENST00000603621 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 NMT2O60551 498 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 NDUFB10O96000 172 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 UBXN2AP68543 259 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 IRF5Q13568 498 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
TUBE1-204ENST00000603621 IL25Q9H293 177 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms