RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 WDR19Q8NEZ3 1342 aa23.53■■□□□ 1.36
SHKBP1-222ENST00000600320 A0A0G2JLL6 359 aaPredicted RBP23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 AOC2O75106 756 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 VEGFBP49765 207 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 HMGCS2P54868 508 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 CCDC178Q5BJE1 867 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 SH3D19Q5HYK7 790 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 PRRT2Q7Z6L0 340 aaPredicted RBP23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 MTA3Q9BTC8 594 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 LY9Q9HBG7 655 aa23.52■■□□□ 1.36
SHKBP1-222ENST00000600320 C19orf81C9J6K1 198 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 TOP1P11387 765 aaKnown RBP23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 SNAPC2Q13487 334 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 WTAPQ15007 396 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 PPP4R3BQ5MIZ7 849 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 USP17L2Q6R6M4 530 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 BRI3BPQ8WY22 251 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 VCPKMTQ9H867 229 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 CYP46A1Q9Y6A2 500 aa23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 WDR33Q9C0J8 1336 aaKnown RBP23.51■■□□□ 1.35
SHKBP1-222ENST00000600320 GTF2A2P52657 109 aa23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 KIF23Q02241 960 aaPredicted RBP23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 IFIT1BQ5T764 474 aaKnown RBP23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 Q6ZUG5 572 aa23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 RASGRP2Q7LDG7 609 aa23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 C12orf42Q96LP6 360 aa23.5■■□□□ 1.35
SHKBP1-222ENST00000600320 CCL15-CCL14A0A0B4J2E2 113 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 ERICH2A1L162 156 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 F5H6K3 240 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 NDUFB10O96000 172 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 KLRC3Q07444 240 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 CCL15Q16663 113 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 CHMP4CQ96CF2 233 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 SH2D4AQ9H788 454 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 SYNPO2Q9UMS6 1093 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 LOC285556D6RIA3 1793 aa23.49■■□□□ 1.35
SHKBP1-222ENST00000600320 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 MANSC4A6NHS7 340 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 CETPP11597 493 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 NOGQ13253 232 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 GADL1Q6ZQY3 521 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 SPICE1Q8N0Z3 855 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 PTPN18Q99952 460 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 KAT14Q9H8E8 782 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 PDRG1Q9NUG6 133 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 TMOD4Q9NZQ9 345 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
SHKBP1-222ENST00000600320 RAD21O60216 631 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 LIFRP42702 1097 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 USP14P54578 494 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 TREML2Q5T2D2 321 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 SLFN13Q68D06 897 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 GPAT2Q6NUI2 795 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 PNMA1Q8ND90 353 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 GMCL1P1Q8NEA9 526 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 AGXT2Q9BYV1 514 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 GOPCQ9HD26 462 aa23.47■■□□□ 1.35
SHKBP1-222ENST00000600320 VCAM1P19320 739 aa23.46■■□□□ 1.35
SHKBP1-222ENST00000600320 TOB2Q14106 344 aaPredicted RBP23.46■■□□□ 1.35
SHKBP1-222ENST00000600320 NUP88Q99567 741 aaPredicted RBP23.46■■□□□ 1.35
SHKBP1-222ENST00000600320 BRPF3Q9ULD4 1205 aa23.46■■□□□ 1.35
SHKBP1-222ENST00000600320 THSD7BQ9C0I4 1608 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 NEK4P51957 841 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 FASTKD5Q7L8L6 764 aaKnown RBP23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 SGMS1Q86VZ5 419 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 FBXL16Q8N461 479 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 PROCA1Q8NCQ7 364 aaPredicted RBP23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 BRF1Q92994 677 aa23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 LARP6Q9BRS8 491 aaKnown RBP23.45■■□□□ 1.34
SHKBP1-222ENST00000600320 IGF2BP3O00425 579 aaKnown RBP eCLIP23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 PDHBP11177 359 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 FGD1P98174 961 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 APOBRQ0VD83 1088 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 FAM83BQ5T0W9 1011 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 NFXL1Q6ZNB6 911 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 RAB11FIP4Q86YS3 637 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 ZNF654Q8IZM8 581 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 FAM43AQ8N2R8 423 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 LPAR1Q92633 364 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 MYL10Q9BUA6 226 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 AGTPBP1Q9UPW5 1226 aa23.44■■□□□ 1.34
SHKBP1-222ENST00000600320 CCDC69A6NI79 296 aa23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 TM4SF4P48230 202 aa23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 AK2P54819 239 aa23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 RABEP1Q15276 862 aa23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 TMTC2Q8N394 836 aa23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 RPAP3Q9H6T3 665 aaPredicted RBP23.43■■□□□ 1.34
SHKBP1-222ENST00000600320 FRMPD2Q68DX3 1309 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 WDR46O15213 610 aaKnown RBP23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 SNHG28P0DPA3 235 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 MAP2K2P36507 400 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 SREBF2Q12772 1141 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 TROAPQ12815 778 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 ANKRD23Q86SG2 305 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 GMCL1Q96IK5 515 aa23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-222ENST00000600320 KLF18A0A0U1RQI7 1052 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms