RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 SEPT2Q15019 361 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 SHHQ15465 462 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 RIOK1Q9BRS2 568 aaKnown RBP18.18■□□□□ 0.5
XRCC1-209ENST00000599693 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
XRCC1-209ENST00000599693 GABPAQ06546 454 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 COG2Q14746 738 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 SNX17Q15036 470 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 ANO1Q5XXA6 986 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
XRCC1-209ENST00000599693 PRDM5Q9NQX1 630 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-209ENST00000599693 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
XRCC1-209ENST00000599693 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
XRCC1-209ENST00000599693 A0A1W2PRG0 241 aa18.16■□□□□ 0.5
XRCC1-209ENST00000599693 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
XRCC1-209ENST00000599693 ERCC3P19447 782 aa18.16■□□□□ 0.5
XRCC1-209ENST00000599693 TRIM60Q495X7 471 aa18.16■□□□□ 0.5
XRCC1-209ENST00000599693 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
XRCC1-209ENST00000599693 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
XRCC1-209ENST00000599693 MAGEB6P1A0A0J9YX57 407 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 MPHOSPH10O00566 681 aaKnown RBP18.15■□□□□ 0.5
XRCC1-209ENST00000599693 COBLO75128 1261 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 BADQ92934 168 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 PDLIM7Q9NR12 457 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 SLC5A4Q9NY91 659 aa18.15■□□□□ 0.5
XRCC1-209ENST00000599693 PARP14Q460N5 1801 aa18.14■□□□□ 0.5
XRCC1-209ENST00000599693 MYH8P13535 1937 aa18.14■□□□□ 0.49
XRCC1-209ENST00000599693 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
XRCC1-209ENST00000599693 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.49
XRCC1-209ENST00000599693 LRRC41Q15345 812 aa18.14■□□□□ 0.49
XRCC1-209ENST00000599693 ABRAQ8N0Z2 381 aa18.14■□□□□ 0.49
XRCC1-209ENST00000599693 MAFAQ8NHW3 353 aaPredicted RBP18.14■□□□□ 0.49
XRCC1-209ENST00000599693 CRNKL1Q9BZJ0 848 aaKnown RBP18.14■□□□□ 0.49
XRCC1-209ENST00000599693 MROH8Q9H579 483 aa18.14■□□□□ 0.49
XRCC1-209ENST00000599693 DSG3P32926 999 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 ADCYAP1R1P41586 468 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 EVX2Q03828 476 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 C1orf53Q5VUE5 145 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 TMEM179Q6ZVK1 233 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 AACSQ86V21 672 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
XRCC1-209ENST00000599693 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 PDE6AP16499 860 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 PLS1Q14651 629 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 TTF1Q15361 905 aaPredicted RBP18.12■□□□□ 0.49
XRCC1-209ENST00000599693 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 KIAA1755Q5JYT7 1200 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 PRAMEF19Q5SWL8 479 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 SH3RF1Q7Z6J0 888 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 NCAPG2Q86XI2 1143 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
XRCC1-209ENST00000599693 MAML3Q96JK9 1138 aa18.12■□□□□ 0.49
XRCC1-209ENST00000599693 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
XRCC1-209ENST00000599693 FLOT1O75955 427 aa18.11■□□□□ 0.49
XRCC1-209ENST00000599693 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
XRCC1-209ENST00000599693 ITPRIPQ8IWB1 547 aa18.11■□□□□ 0.49
XRCC1-209ENST00000599693 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
XRCC1-209ENST00000599693 MYLIPQ8WY64 445 aa18.11■□□□□ 0.49
XRCC1-209ENST00000599693 ATG4CQ96DT6 458 aa18.11■□□□□ 0.49
XRCC1-209ENST00000599693 TTYH1Q9H313 450 aaPredicted RBP18.11■□□□□ 0.49
XRCC1-209ENST00000599693 COL11A1P12107 1806 aaPredicted RBP18.1■□□□□ 0.49
XRCC1-209ENST00000599693 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 FCER1AP12319 257 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 TLE2Q04725 743 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 SLC9C2Q5TAH2 1124 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 SDR42E1Q8WUS8 393 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 SH2D4AQ9H788 454 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 ARHGEF10LQ9HCE6 1279 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 DCP1AQ9NPI6 582 aaPredicted RBP18.1■□□□□ 0.49
XRCC1-209ENST00000599693 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 NRBP1Q9UHY1 535 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 EXOC6BQ9Y2D4 811 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 TMX2Q9Y320 296 aa18.1■□□□□ 0.49
XRCC1-209ENST00000599693 PLXNA1Q9UIW2 1896 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 ZNF532Q9HCE3 1301 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 CYP2D6P10635 497 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 ICA1Q05084 483 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 CLEC10AQ8IUN9 316 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 SPICE1Q8N0Z3 855 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 TACC3Q9Y6A5 838 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 SMCHD1A6NHR9 2005 aa18.09■□□□□ 0.49
XRCC1-209ENST00000599693 TMEM265A0A087WTH1 108 aa18.08■□□□□ 0.48
XRCC1-209ENST00000599693 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
XRCC1-209ENST00000599693 WDR46O15213 610 aaKnown RBP18.08■□□□□ 0.48
XRCC1-209ENST00000599693 SLC25A27O95847 323 aa18.08■□□□□ 0.48
XRCC1-209ENST00000599693 CLTBP09497 229 aa18.08■□□□□ 0.48
XRCC1-209ENST00000599693 RARBP10826 455 aa18.08■□□□□ 0.48
XRCC1-209ENST00000599693 RLBP1P12271 317 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms