RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
XRCC1-207ENST00000598165 GOPCQ9HD26 462 aa16.67■□□□□ 0.26
XRCC1-207ENST00000598165 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-207ENST00000598165 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 RAD21O60216 631 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 VCAM1P19320 739 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-207ENST00000598165 TRDNQ13061 729 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
XRCC1-207ENST00000598165 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
XRCC1-207ENST00000598165 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-207ENST00000598165 LPAR1Q92633 364 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 MKL1Q969V6 931 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
XRCC1-207ENST00000598165 B4E1Z4 1266 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 NMT2O60551 498 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 KDM4AO75164 1064 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 SPICE1Q8N0Z3 855 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 ZNF296Q8WUU4 475 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-207ENST00000598165 ASCC2Q9H1I8 757 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-207ENST00000598165 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-207ENST00000598165 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
XRCC1-207ENST00000598165 FKTNO75072 461 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 REC8O95072 547 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 RNF20Q5VTR2 975 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 CATSPERGQ6ZRH7 1159 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
XRCC1-207ENST00000598165 CPA4Q9UI42 421 aa16.64■□□□□ 0.25
XRCC1-207ENST00000598165 E7EWF7 191 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 F5H6K3 240 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 SLC27A2O14975 620 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 WDR46O15213 610 aaKnown RBP16.63■□□□□ 0.25
XRCC1-207ENST00000598165 SP3Q02447 781 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 KLRC3Q07444 240 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 CREB3L3Q68CJ9 461 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 C17orf99Q6UX52 265 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
XRCC1-207ENST00000598165 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
XRCC1-207ENST00000598165 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 ADGRA2Q96PE1 1338 aa16.63■□□□□ 0.25
XRCC1-207ENST00000598165 NDUFB10O96000 172 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 GCLCP48506 637 aaPredicted RBP16.62■□□□□ 0.25
XRCC1-207ENST00000598165 NOVP48745 357 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 HERVK_113P62684 666 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 TTC14Q96N46 770 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
XRCC1-207ENST00000598165 PDE4DIPQ5VU43 2346 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 BCRP11274 1271 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
XRCC1-207ENST00000598165 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
XRCC1-207ENST00000598165 ERO1AQ96HE7 468 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
XRCC1-207ENST00000598165 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
XRCC1-207ENST00000598165 COG2Q14746 738 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 HOXC10Q9NYD6 342 aa16.6■□□□□ 0.25
XRCC1-207ENST00000598165 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
XRCC1-207ENST00000598165 FLOT1O75955 427 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-207ENST00000598165 KIF22Q14807 665 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 CYB5R4Q7L1T6 521 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 CD99L2Q8TCZ2 262 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-207ENST00000598165 TNKSO95271 1327 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 HTTP42858 3142 aa16.59■□□□□ 0.25
XRCC1-207ENST00000598165 MYH4Q9Y623 1939 aa16.58■□□□□ 0.25
XRCC1-207ENST00000598165 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
XRCC1-207ENST00000598165 BMP3P12645 472 aa16.58■□□□□ 0.24
XRCC1-207ENST00000598165 MCCP23508 829 aa16.58■□□□□ 0.24
XRCC1-207ENST00000598165 DSG3P32926 999 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms