RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MYO1CO00159 1063 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 GNAT2P19087 354 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 CASP8Q14790 479 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 KRT31Q15323 416 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 EARS2Q5JPH6 523 aaKnown RBP19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 FERMT2Q96AC1 680 aa19.67■□□□□ 0.74
ARHGEF1-213ENST00000595897 ERVK-24P63145 666 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 NKX1-1Q15270 411 aaPredicted RBP19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 RNF26Q9BY78 433 aaPredicted RBP19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 AKAP11Q9UKA4 1901 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 SH3RF1Q7Z6J0 888 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 TAB2Q9NYJ8 693 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 LCMT1Q9UIC8 334 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 TNS3Q68CZ2 1445 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 NID2Q14112 1375 aa19.66■□□□□ 0.74
ARHGEF1-213ENST00000595897 KRT9P35527 623 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 LRP2BPQ9P2M1 347 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 COL18A1P39060 1754 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 TNKSO95271 1327 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 ITIH6Q6UXX5 1313 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 PDE8AO60658 829 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 NCAPH2Q6IBW4 605 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 ACBD3Q9H3P7 528 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 MYO6Q9UM54 1294 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 GUCA1BQ9UMX6 200 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 V9GY48 417 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 TRIM66O15016 1216 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 BMP15O95972 392 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 NOA1Q8NC60 698 aaKnown RBP19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 MYO1AQ9UBC5 1043 aa19.65■□□□□ 0.74
ARHGEF1-213ENST00000595897 PES1O00541 588 aaKnown RBP19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 PPARAQ07869 468 aa19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 MROH5Q6ZUA9 1318 aa19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 IVLP07476 585 aa19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 IQUBQ8NA54 791 aa19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 ESR2Q92731 530 aa19.64■□□□□ 0.73
ARHGEF1-213ENST00000595897 TUBBP07437 444 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 RCAN1P53805 252 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 SPAG1Q07617 926 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 PAK1Q13153 545 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 CCDC148Q8NFR7 591 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 MAPK8IP1Q9UQF2 711 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 ECM29Q5VYK3 1845 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 WNT7AO00755 349 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 COPB1P53618 953 aaKnown RBP19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 PTGDRQ13258 359 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 SHISA4Q96DD7 197 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 PHF20Q9BVI0 1012 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 RRP15Q9Y3B9 282 aaKnown RBP19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 SPATA31A3Q5VYP0 1347 aa19.63■□□□□ 0.73
ARHGEF1-213ENST00000595897 RNF225M0QZC1 329 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 ARHGAP25P42331 645 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 UBXN1Q04323 297 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 TTC38Q5R3I4 469 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 SRLQ86TD4 932 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 SDR42E1Q8WUS8 393 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 FGFR2P21802 821 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 TRIM14Q14142 442 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 GOLGA6L1Q8N7Z2 621 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 FAM71BQ8TC56 605 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 LIMA1Q9UHB6 759 aaKnown RBP19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 RTL9Q8NET4 1388 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 KCNJ18B7U540 433 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 KCNJ12Q14500 433 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 PPP2R5BQ15173 497 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 PKN1Q16512 942 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 CATIPQ7Z7H3 387 aa19.62■□□□□ 0.73
ARHGEF1-213ENST00000595897 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 FECHP22830 423 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 BCAMP50895 628 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 TCP11X2Q5H9J9 407 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 MSL3Q8N5Y2 521 aaKnown RBP19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 NELFBQ8WX92 580 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 EPN1Q9Y6I3 576 aaPredicted RBP19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 MYO5AQ9Y4I1 1855 aaKnown RBP19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 ENC1O14682 589 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 CHP1Q99653 195 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 TRIM10Q9UDY6 481 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 RSPH14Q9UHP6 348 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 XDHP47989 1333 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
ARHGEF1-213ENST00000595897 LRP6O75581 1613 aa19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 LRRIQ3A6PVS8 624 aaPredicted RBP19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 PLEKHA8P1O95397 391 aa19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 TSR1Q2NL82 804 aaKnown RBP19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 LRRC10BA6NIK2 292 aa19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 NDUFA10O95299 355 aa19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 CYP7A1P22680 504 aa19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
ARHGEF1-213ENST00000595897 PIGBQ92521 554 aa19.59■□□□□ 0.73
ARHGEF1-213ENST00000595897 MED4Q9NPJ6 270 aa19.59■□□□□ 0.73
ARHGEF1-213ENST00000595897 ABCF2Q9UG63 623 aa19.59■□□□□ 0.73
ARHGEF1-213ENST00000595897 IQSEC3Q9UPP2 1182 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms