RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ATP2B2Q01814 1243 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 USP17L24Q0WX57 530 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 DGKZQ13574 1117 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 CLEC10AQ8IUN9 316 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 TBC1D10CQ8IV04 446 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 ESR2Q92731 530 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 CEP95Q96GE4 821 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 ASCC2Q9H1I8 757 aaPredicted RBP30.47■■■□□ 2.47
TRIM28-204ENST00000594806 TCP11L1Q9NUJ3 509 aa30.47■■■□□ 2.47
TRIM28-204ENST00000594806 GTF3C2Q8WUA4 911 aaPredicted RBP30.46■■■□□ 2.47
TRIM28-204ENST00000594806 ERO1AQ96HE7 468 aa30.46■■■□□ 2.47
TRIM28-204ENST00000594806 CNNM2Q9H8M5 875 aa30.46■■■□□ 2.47
TRIM28-204ENST00000594806 ARHGEF6Q15052 776 aa30.45■■■□□ 2.47
TRIM28-204ENST00000594806 RRP12Q5JTH9 1297 aaKnown RBP30.45■■■□□ 2.47
TRIM28-204ENST00000594806 CLIP2Q9UDT6 1046 aa30.45■■■□□ 2.47
TRIM28-204ENST00000594806 CATSPERGQ6ZRH7 1159 aa30.44■■■□□ 2.46
TRIM28-204ENST00000594806 KRT23Q9C075 422 aa30.44■■■□□ 2.46
TRIM28-204ENST00000594806 LSG1Q9H089 658 aaKnown RBP30.44■■■□□ 2.46
TRIM28-204ENST00000594806 WDR46O15213 610 aaKnown RBP30.43■■■□□ 2.46
TRIM28-204ENST00000594806 BCRP11274 1271 aa30.43■■■□□ 2.46
TRIM28-204ENST00000594806 CCDC178Q5BJE1 867 aa30.43■■■□□ 2.46
TRIM28-204ENST00000594806 RPAP3Q9H6T3 665 aaPredicted RBP30.43■■■□□ 2.46
TRIM28-204ENST00000594806 CPA4Q9UI42 421 aa30.43■■■□□ 2.46
TRIM28-204ENST00000594806 NOVP48745 357 aa30.42■■■□□ 2.46
TRIM28-204ENST00000594806 KIF22Q14807 665 aa30.42■■■□□ 2.46
TRIM28-204ENST00000594806 ANO2Q9NQ90 1003 aa30.42■■■□□ 2.46
TRIM28-204ENST00000594806 IL17RBQ9NRM6 502 aa30.42■■■□□ 2.46
TRIM28-204ENST00000594806 RBM8AQ9Y5S9 174 aaKnown RBP30.42■■■□□ 2.46
TRIM28-204ENST00000594806 TTC14Q96N46 770 aa30.41■■■□□ 2.46
TRIM28-204ENST00000594806 NEDD4P46934 1319 aa30.41■■■□□ 2.46
TRIM28-204ENST00000594806 CYP21A2P08686 494 aa30.4■■■□□ 2.46
TRIM28-204ENST00000594806 HERVK_113P62684 666 aa30.4■■■□□ 2.46
TRIM28-204ENST00000594806 TRDNQ13061 729 aa30.4■■■□□ 2.46
TRIM28-204ENST00000594806 FAM110CQ1W6H9 321 aa30.4■■■□□ 2.46
TRIM28-204ENST00000594806 CTU1Q7Z7A3 348 aaKnown RBP30.4■■■□□ 2.46
TRIM28-204ENST00000594806 GMCL1P1Q8NEA9 526 aa30.4■■■□□ 2.46
TRIM28-204ENST00000594806 P2RX7Q99572 595 aaKnown RBP30.4■■■□□ 2.46
TRIM28-204ENST00000594806 F5H6K3 240 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 KLRC3Q07444 240 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 COL13A1Q5TAT6 717 aaPredicted RBP30.39■■■□□ 2.46
TRIM28-204ENST00000594806 LBX2Q6XYB7 198 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 IQCA1Q86XH1 822 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 HOXC10Q9NYD6 342 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 STX8Q9UNK0 236 aa30.39■■■□□ 2.46
TRIM28-204ENST00000594806 LACTBP83111 547 aaPredicted RBP30.38■■■□□ 2.45
TRIM28-204ENST00000594806 COG2Q14746 738 aa30.38■■■□□ 2.45
TRIM28-204ENST00000594806 KIAA1755Q5JYT7 1200 aa30.38■■■□□ 2.45
TRIM28-204ENST00000594806 SPICE1Q8N0Z3 855 aa30.38■■■□□ 2.45
TRIM28-204ENST00000594806 MYPNQ86TC9 1320 aa30.38■■■□□ 2.45
TRIM28-204ENST00000594806 GNRH1P01148 92 aa30.37■■■□□ 2.45
TRIM28-204ENST00000594806 PKN2Q16513 984 aaKnown RBP30.37■■■□□ 2.45
TRIM28-204ENST00000594806 TANGO6Q9C0B7 1094 aa30.37■■■□□ 2.45
TRIM28-204ENST00000594806 MORF4L1Q9UBU8 362 aa30.37■■■□□ 2.45
TRIM28-204ENST00000594806 B4E1Z4 1266 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 KDM4AO75164 1064 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 RNF20Q5VTR2 975 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 DGKHQ86XP1 1220 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 ANKRD13CQ8N6S4 541 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 CD99L2Q8TCZ2 262 aa30.36■■■□□ 2.45
TRIM28-204ENST00000594806 RAD21O60216 631 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 NMT2O60551 498 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 NDUFB10O96000 172 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 TOP1P11387 765 aaKnown RBP30.35■■■□□ 2.45
TRIM28-204ENST00000594806 NECTIN1Q15223 517 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 ZSWIM5Q9P217 1185 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 RABGAP1Q9Y3P9 1069 aa30.35■■■□□ 2.45
TRIM28-204ENST00000594806 REC8O95072 547 aa30.34■■■□□ 2.45
TRIM28-204ENST00000594806 LRRC47Q8N1G4 583 aaKnown RBP30.34■■■□□ 2.45
TRIM28-204ENST00000594806 NCOA7Q8NI08 942 aa30.34■■■□□ 2.45
TRIM28-204ENST00000594806 EFCC1Q9HA90 598 aa30.34■■■□□ 2.45
TRIM28-204ENST00000594806 E7EWF7 191 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 EPB41L2O43491 1005 aaKnown RBP30.33■■■□□ 2.45
TRIM28-204ENST00000594806 FLOT1O75955 427 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 SLFN13Q68D06 897 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 RALYLQ86SE5 291 aaKnown RBP30.33■■■□□ 2.45
TRIM28-204ENST00000594806 MB21D1Q8N884 522 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 GPRC5AQ8NFJ5 357 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 ANKS1AQ92625 1134 aa30.33■■■□□ 2.45
TRIM28-204ENST00000594806 RLFQ13129 1914 aa30.32■■■□□ 2.44
TRIM28-204ENST00000594806 SPDYE16A6NNV3 312 aaPredicted RBP30.32■■■□□ 2.44
TRIM28-204ENST00000594806 DSG3P32926 999 aa30.32■■■□□ 2.44
TRIM28-204ENST00000594806 GMCL1Q96IK5 515 aa30.32■■■□□ 2.44
TRIM28-204ENST00000594806 RBPJLQ9UBG7 517 aa30.32■■■□□ 2.44
TRIM28-204ENST00000594806 MGAMO43451 1857 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 PARP14Q460N5 1801 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 SLC27A2O14975 620 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 HOXD10P28358 340 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 FCGRTP55899 365 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 FAM83BQ5T0W9 1011 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 CREB3L3Q68CJ9 461 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 ZSCAN10Q96SZ4 725 aaPredicted RBP30.31■■■□□ 2.44
TRIM28-204ENST00000594806 TMEM47Q9BQJ4 181 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 UBAC1Q9BSL1 405 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 TRIM17Q9Y577 477 aa30.31■■■□□ 2.44
TRIM28-204ENST00000594806 PSMC4P43686 418 aa30.3■■■□□ 2.44
TRIM28-204ENST00000594806 PRMT2P55345 433 aa30.3■■■□□ 2.44
TRIM28-204ENST00000594806 RCSD1Q6JBY9 416 aa30.3■■■□□ 2.44
TRIM28-204ENST00000594806 OTOP1Q7RTM1 612 aa30.3■■■□□ 2.44
TRIM28-204ENST00000594806 BMP3P12645 472 aa30.29■■■□□ 2.44
TRIM28-204ENST00000594806 SLC1A4P43007 532 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms