RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 HOXC10Q9NYD6 342 aa21.17■□□□□ 0.98
SHKBP1-203ENST00000594298 SWAP70Q9UH65 585 aa21.17■□□□□ 0.98
SHKBP1-203ENST00000594298 SUPT16HQ9Y5B9 1047 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-203ENST00000594298 LAMA3Q16787 3333 aa21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 MSCO60682 206 aa21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 ATP2B2Q01814 1243 aa21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 TMEM179Q6ZVK1 233 aa21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 DCTPP1Q9H773 170 aa21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 DDX20Q9UHI6 824 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-203ENST00000594298 MPHOSPH10O00566 681 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-203ENST00000594298 LRRC26Q2I0M4 334 aa21.15■□□□□ 0.98
SHKBP1-203ENST00000594298 TDHQ8IZJ6 230 aa21.15■□□□□ 0.98
SHKBP1-203ENST00000594298 NPLOC4Q8TAT6 608 aa21.15■□□□□ 0.98
SHKBP1-203ENST00000594298 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
SHKBP1-203ENST00000594298 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 STRNO43815 780 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 MB21D1Q8N884 522 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 SHCBP1Q8NEM2 672 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 LPAR1Q92633 364 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 MOV10L1Q9BXT6 1211 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 ATP8A2Q9NTI2 1148 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 PAG1Q9NWQ8 432 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.97
SHKBP1-203ENST00000594298 CYP2D6P10635 497 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 ATP5JP18859 108 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 ADD2P35612 726 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 SLC44A5Q8NCS7 719 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 TANGO6Q9C0B7 1094 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 UBE2OQ9C0C9 1292 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 SPATC1LQ9H0A9 340 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 ARMT1Q9H993 441 aa21.13■□□□□ 0.97
SHKBP1-203ENST00000594298 CYP2C19P33261 490 aa21.12■□□□□ 0.97
SHKBP1-203ENST00000594298 KIAA1755Q5JYT7 1200 aa21.12■□□□□ 0.97
SHKBP1-203ENST00000594298 OLFML2BQ68BL8 750 aa21.12■□□□□ 0.97
SHKBP1-203ENST00000594298 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
SHKBP1-203ENST00000594298 TMX2Q9Y320 296 aa21.12■□□□□ 0.97
SHKBP1-203ENST00000594298 DNM1LO00429 736 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 CYBAP13498 195 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 ADORA2AP29274 412 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 DPP9Q86TI2 863 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 TRPV1Q8NER1 839 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 DYNLL2Q96FJ2 89 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 CCDC17Q96LX7 622 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 HAUS7Q99871 368 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 BOLA2Q9H3K6 86 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 SH2D4AQ9H788 454 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 ARHGEF10LQ9HCE6 1279 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
SHKBP1-203ENST00000594298 PRKAB2O43741 272 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 MBD4O95243 580 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 AKR1B1P15121 316 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 ERCC3P19447 782 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 CNGA1P29973 690 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 DSG3P32926 999 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 ICA1Q05084 483 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 ABRAQ8N0Z2 381 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 SENP6Q9GZR1 1112 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 MROH8Q9H579 483 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 VCPKMTQ9H867 229 aa21.1■□□□□ 0.97
SHKBP1-203ENST00000594298 A0A0G2JMZ2 1700 aa21.09■□□□□ 0.97
SHKBP1-203ENST00000594298 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
SHKBP1-203ENST00000594298 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
SHKBP1-203ENST00000594298 C12orf60Q5U649 245 aa21.09■□□□□ 0.97
SHKBP1-203ENST00000594298 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-203ENST00000594298 WDR46O15213 610 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 COBLO75128 1261 aa21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 FLOT1O75955 427 aa21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 C16orf86Q6ZW13 317 aa21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 AMOTL1Q8IY63 956 aa21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 SLC5A4Q9NY91 659 aa21.08■□□□□ 0.97
SHKBP1-203ENST00000594298 FRMPD3Q5JV73 1810 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 CDK8P49336 464 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 HDAC1Q13547 482 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 CLEC10AQ8IUN9 316 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 SPICE1Q8N0Z3 855 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 DEFB123Q8N688 67 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 ARRDC4Q8NCT1 418 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 SLC17A8Q8NDX2 589 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 ATG4CQ96DT6 458 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 DDRGK1Q96HY6 314 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 ADAMTS5Q9UNA0 930 aa21.07■□□□□ 0.96
SHKBP1-203ENST00000594298 RLFQ13129 1914 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 USP17L12C9JPN9 530 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 USP17L21D6R901 530 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 SEPT4O43236 478 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 MDM2Q00987 491 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 GPATCH3Q96I76 525 aa21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 RWDD1Q9H446 243 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-203ENST00000594298 CYP2D7A0A087X1C5 515 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 SMIM22K7EJ46 135 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 SMARCA5O60264 1052 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 SLC25A27O95847 323 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 PLS1Q14651 629 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 ZSCAN25Q6NSZ9 544 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 KANSL2Q9H9L4 492 aa21.05■□□□□ 0.96
SHKBP1-203ENST00000594298 CHGBP05060 677 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms