RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ATAD5Q96QE3 1844 aa25.53■■□□□ 1.68
R3HDM4-206ENST00000590454 DOCK1Q14185 1865 aa25.53■■□□□ 1.68
R3HDM4-206ENST00000590454 CAP2P40123 477 aa25.52■■□□□ 1.68
R3HDM4-206ENST00000590454 ANKRD13CQ8N6S4 541 aa25.52■■□□□ 1.68
R3HDM4-206ENST00000590454 LSG1Q9H089 658 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-206ENST00000590454 ZMYM6O95789 1325 aa25.52■■□□□ 1.68
R3HDM4-206ENST00000590454 TRIM75PA6NK02 468 aa25.51■■□□□ 1.67
R3HDM4-206ENST00000590454 BMP8BP34820 402 aa25.51■■□□□ 1.67
R3HDM4-206ENST00000590454 AGTPBP1Q9UPW5 1226 aa25.51■■□□□ 1.67
R3HDM4-206ENST00000590454 PRDM1O75626 825 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 CERKLQ49MI3 558 aaPredicted RBP25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 CASC1Q6TDU7 716 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 ANKLE1Q8NAG6 615 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 GDF15Q99988 308 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.5■■□□□ 1.675e-7■■■■■ 47.8
R3HDM4-206ENST00000590454 SWAP70Q9UH65 585 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 ANAPC4Q9UJX5 808 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 PNMA3Q9UL41 463 aa25.5■■□□□ 1.67
R3HDM4-206ENST00000590454 MYH8P13535 1937 aa25.49■■□□□ 1.67
R3HDM4-206ENST00000590454 FAM110CQ1W6H9 321 aa25.49■■□□□ 1.67
R3HDM4-206ENST00000590454 GPR153Q6NV75 609 aa25.49■■□□□ 1.67
R3HDM4-206ENST00000590454 GH2P01242 217 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 AKR1B1P15121 316 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 RASA1P20936 1047 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 TBC1D10CQ8IV04 446 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 DIS3LQ8TF46 1054 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 MAP4K1Q92918 833 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 ANO2Q9NQ90 1003 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 ZBTB21Q9ULJ3 1066 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 LAMA4Q16363 1823 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 PHIPQ8WWQ0 1821 aa25.48■■□□□ 1.67
R3HDM4-206ENST00000590454 GUCY1A2P33402 732 aa25.47■■□□□ 1.67
R3HDM4-206ENST00000590454 MNX1P50219 401 aaPredicted RBP25.47■■□□□ 1.67
R3HDM4-206ENST00000590454 ABCB5Q2M3G0 1257 aa25.47■■□□□ 1.67
R3HDM4-206ENST00000590454 C7orf61Q8IZ16 206 aa25.47■■□□□ 1.67
R3HDM4-206ENST00000590454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.47■■□□□ 1.674e-7■■□□□ 13.8
R3HDM4-206ENST00000590454 TAF6LQ9Y6J9 622 aa25.47■■□□□ 1.67
R3HDM4-206ENST00000590454 KIAA1211Q6ZU35 1233 aa25.46■■□□□ 1.67
R3HDM4-206ENST00000590454 PROCA1Q8NCQ7 364 aaPredicted RBP25.46■■□□□ 1.67
R3HDM4-206ENST00000590454 RBM8AQ9Y5S9 174 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-206ENST00000590454 MPHOSPH10O00566 681 aaKnown RBP25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 HMGCRP04035 888 aa25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 GCLCP48506 637 aaPredicted RBP25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 TREML2Q5T2D2 321 aa25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 CLEC10AQ8IUN9 316 aa25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 MKNK2Q9HBH9 465 aa25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 ZMYND8Q9ULU4 1186 aaPredicted RBP25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 U3KPZ7 1027 aaPredicted RBP25.45■■□□□ 1.66
R3HDM4-206ENST00000590454 RPTORQ8N122 1335 aa25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 ZNF213O14771 459 aa25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 SEPT2Q15019 361 aa25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 HMX1Q9NP08 348 aaPredicted RBP25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 CTNNA3Q9UI47 895 aa25.44■■□□□ 1.66
R3HDM4-206ENST00000590454 SLC3A2P08195 630 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 ASNSP08243 561 aa25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 CYP21A2P08686 494 aa25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 FGRP09769 529 aa25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 PABPC4Q13310 644 aaKnown RBP eCLIP25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 IMMTQ16891 758 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 DEFB123Q8N688 67 aa25.43■■□□□ 1.66
R3HDM4-206ENST00000590454 NEDD4P46934 1319 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 USP17L5A8MUK1 530 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 PDE4BQ07343 736 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 RAB3GAP1Q15042 981 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 FAM47AQ5JRC9 791 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 AKNAD1Q5T1N1 836 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 STAG1Q8WVM7 1258 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 GJD2Q9UKL4 321 aa25.42■■□□□ 1.66
R3HDM4-206ENST00000590454 GREB1LQ9C091 1923 aaPredicted RBP25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 SPP2Q13103 211 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 LRIT3Q3SXY7 679 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 CCDC17Q96LX7 622 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 TBC1D2Q9BYX2 928 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 C11orf49Q9H6J7 331 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 CABP5Q9NP86 173 aa25.41■■□□□ 1.66
R3HDM4-206ENST00000590454 ORC4O43929 436 aa25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 RRP12Q5JTH9 1297 aaKnown RBP25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 SIAH1Q8IUQ4 282 aa25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 ZNF444Q8N0Y2 327 aaPredicted RBP25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 ZNF280CQ8ND82 737 aa25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 GINM1Q9NU53 330 aa25.4■■□□□ 1.66
R3HDM4-206ENST00000590454 SYN1P17600 705 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 NECTIN1Q15223 517 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 MFSD6Q6ZSS7 791 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 TMEM179Q6ZVK1 233 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 TDHQ8IZJ6 230 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 ACER1Q8TDN7 264 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 TOMM22Q9NS69 142 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 STXBP5LQ9Y2K9 1186 aa25.39■■□□□ 1.66
R3HDM4-206ENST00000590454 PTPRFP10586 1907 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 SLC27A2O14975 620 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 MAGEA10P43363 369 aaPredicted RBP25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 TFAP4Q01664 338 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 TRIM32Q13049 653 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 STOX1Q6ZVD7 989 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 WDR18Q9BV38 432 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 ZNF287Q9HBT7 754 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 OGDHLQ9ULD0 1010 aa25.38■■□□□ 1.65
R3HDM4-206ENST00000590454 IGKV6D-41A0A0C4DH26 115 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms