RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 PALM3A6NDB9 673 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 EEF2P13639 858 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 NF2P35240 595 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 SEPT2Q15019 361 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 CLEC17AQ6ZS10 378 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 RAB11FIP4Q86YS3 637 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 ZSCAN16Q9H4T2 348 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 GDF11O95390 407 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 FDPSP14324 419 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 ATP2B2Q01814 1243 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 C8orf76Q96K31 380 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 SLC26A6Q9BXS9 759 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 ZBTB21Q9ULJ3 1066 aa12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 ASTN2O75129 1339 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-224ENST00000588712 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 PHF20L1A8MW92 1017 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 GOLGA6L22H0YM25 854 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 PTMSP20962 102 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 NBPF12Q5TAG4 269 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 MAD2L2Q9UI95 211 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 VPS37CA5D8V6 355 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 PPP1R12BO60237 982 aaPredicted RBP12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 PDHBP11177 359 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 GUCY1A2P33402 732 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 CDC37L1Q7L3B6 337 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 FBXO18Q8NFZ0 1043 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 PHKBQ93100 1093 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 ALG1Q9BT22 464 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 SPZ1Q9BXG8 430 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 MTMR6Q9Y217 621 aa12.25□□□□□ -0.45
NEDD4L-224ENST00000588712 F13A1P00488 732 aa12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 VEGFAP15692 232 aaPredicted RBP12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 AS3MTQ9HBK9 375 aa12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 TMX2Q9Y320 296 aa12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 V9GY48 417 aaPredicted RBP12.24□□□□□ -0.45
NEDD4L-224ENST00000588712 SLC1A4P43007 532 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 FUT2Q10981 343 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SLFN13Q68D06 897 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SRBD1Q8N5C6 995 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 F5H6K3 240 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 KLRC3Q07444 240 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 PKP1Q13835 747 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SCYL3Q8IZE3 742 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 SEC63Q9UGP8 760 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-224ENST00000588712 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 NOL9Q5SY16 702 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 ATL3Q6DD88 541 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 KLRG1Q96E93 195 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 MYH4Q9Y623 1939 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 UNCXA6NJT0 531 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 POTECB2RU33 542 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 SCG2P13521 617 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 USP14P54578 494 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 TRAF1Q13077 416 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 STAG2Q8N3U4 1231 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 WRNIP1Q96S55 665 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 RIOX1Q9H6W3 641 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 SCAF8Q9UPN6 1271 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
NEDD4L-224ENST00000588712 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms