RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 SCYL3Q8IZE3 742 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
NLE1-205ENST00000588642 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
NLE1-205ENST00000588642 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
NLE1-205ENST00000588642 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
NLE1-205ENST00000588642 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
NLE1-205ENST00000588642 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 CDKL5O76039 1030 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 GRM4Q14833 912 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 CCDC84Q86UT8 332 aaPredicted RBP16.36■□□□□ 0.21
NLE1-205ENST00000588642 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.36■□□□□ 0.21
NLE1-205ENST00000588642 ACER1Q8TDN7 264 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 SH2D4AQ9H788 454 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
NLE1-205ENST00000588642 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.36■□□□□ 0.21
NLE1-205ENST00000588642 JAK2O60674 1132 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 PPFIA3O75145 1194 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
NLE1-205ENST00000588642 GNAQP50148 359 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 ARMC9Q7Z3E5 817 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 NSUN7Q8NE18 718 aaKnown RBP16.35■□□□□ 0.21
NLE1-205ENST00000588642 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 CSADQ9Y600 493 aa16.35■□□□□ 0.21
NLE1-205ENST00000588642 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 F5H6K3 240 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 GJB2P29033 226 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 ECE1P42892 770 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 HMGN5P82970 282 aaKnown RBP16.34■□□□□ 0.21
NLE1-205ENST00000588642 FMR1Q06787 632 aaKnown RBP eCLIP16.34■□□□□ 0.21
NLE1-205ENST00000588642 KLRC3Q07444 240 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 NOL9Q5SY16 702 aaKnown RBP16.34■□□□□ 0.21
NLE1-205ENST00000588642 USP17L2Q6R6M4 530 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 MOB2Q70IA6 237 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 CCDC82Q8N4S0 544 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 FEZ1Q99689 392 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
NLE1-205ENST00000588642 SYNPO2Q9UMS6 1093 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 TMX2Q9Y320 296 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 NID2Q14112 1375 aa16.34■□□□□ 0.21
NLE1-205ENST00000588642 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 GOLGA8HP0CJ92 632 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 PDHBP11177 359 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 IFNAR1P17181 557 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 PTPRAP18433 802 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.2
NLE1-205ENST00000588642 NTRK3Q16288 839 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.33■□□□□ 0.2
NLE1-205ENST00000588642 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
NLE1-205ENST00000588642 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 SMARCC2Q8TAQ2 1214 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 AS3MTQ9HBK9 375 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 ORC3Q9UBD5 711 aaPredicted RBP16.33■□□□□ 0.2
NLE1-205ENST00000588642 MAD2L2Q9UI95 211 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
NLE1-205ENST00000588642 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
NLE1-205ENST00000588642 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 NDUFB10O96000 172 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
NLE1-205ENST00000588642 VGLL4Q14135 290 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 ZYXQ15942 572 aaKnown RBP16.32■□□□□ 0.2
NLE1-205ENST00000588642 ASPRV1Q53RT3 343 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 RASGRP2Q7LDG7 609 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 TRIM22Q8IYM9 498 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 STAG2Q8N3U4 1231 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 PHKBQ93100 1093 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
NLE1-205ENST00000588642 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
NLE1-205ENST00000588642 KLRF2D3W0D1 207 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
NLE1-205ENST00000588642 SNHG28P0DPA3 235 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 SLC1A4P43007 532 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 SPP2Q13103 211 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
NLE1-205ENST00000588642 C2orf69Q8N8R5 385 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 SNCAIPQ9Y6H5 919 aa16.31■□□□□ 0.2
NLE1-205ENST00000588642 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 CELF2O95319 508 aaKnown RBP16.3■□□□□ 0.2
NLE1-205ENST00000588642 ITGBL1O95965 494 aaPredicted RBP16.3■□□□□ 0.2
NLE1-205ENST00000588642 BMP3P12645 472 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 PDCP20941 246 aa16.3■□□□□ 0.2
NLE1-205ENST00000588642 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms