RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 GABPAQ06546 454 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 PLS1Q14651 629 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 CYP2D7A0A087X1C5 515 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 SLC15A5A6NIM6 579 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 RAB11FIP3O75154 756 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 CHGBP05060 677 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 AKR1B1P15121 316 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 ADD2P35612 726 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 TMEM179Q6ZVK1 233 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■■■ 27.8
HDAC5-208ENST00000588419 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
HDAC5-208ENST00000588419 A0A1W2PPC1 479 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 RAD21O60216 631 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-208ENST00000588419 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-208ENST00000588419 CYP2C19P33261 490 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 MAGEA10P43363 369 aaPredicted RBP16.53■□□□□ 0.24
HDAC5-208ENST00000588419 ICA1Q05084 483 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 ARHGEF10LQ9HCE6 1279 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
HDAC5-208ENST00000588419 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 FLOT1O75955 427 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 GRB14Q14449 540 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 LRRC26Q2I0M4 334 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 LHX8Q68G74 356 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 MOV10L1Q9BXT6 1211 aaKnown RBP16.52■□□□□ 0.24
HDAC5-208ENST00000588419 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.24
HDAC5-208ENST00000588419 RANBP2P49792 3224 aaKnown RBP16.51■□□□□ 0.23
HDAC5-208ENST00000588419 ADORA2AP29274 412 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 COG2Q14746 738 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 NCAPG2Q86XI2 1143 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 HAUS7Q99871 368 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 GDF15Q99988 308 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 UBE2OQ9C0C9 1292 aaKnown RBP16.51■□□□□ 0.23
HDAC5-208ENST00000588419 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
HDAC5-208ENST00000588419 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
HDAC5-208ENST00000588419 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
HDAC5-208ENST00000588419 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 LTBP2Q14767 1821 aa16.51■□□□□ 0.23
HDAC5-208ENST00000588419 ATP5JP18859 108 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 ERCC3P19447 782 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
HDAC5-208ENST00000588419 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
HDAC5-208ENST00000588419 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 ATP8A2Q9NTI2 1148 aa16.5■□□□□ 0.23
HDAC5-208ENST00000588419 GREB1LQ9C091 1923 aaPredicted RBP16.5■□□□□ 0.23
HDAC5-208ENST00000588419 SMCHD1A6NHR9 2005 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 USP17L12C9JPN9 530 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 USP17L21D6R901 530 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 COL6A1P12109 1028 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 CDK8P49336 464 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
HDAC5-208ENST00000588419 DSG3P32926 999 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 GJC2Q5T442 439 aaPredicted RBP16.48■□□□□ 0.23
HDAC5-208ENST00000588419 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 TDHQ8IZJ6 230 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 LPAR1Q92633 364 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
HDAC5-208ENST00000588419 MSCO60682 206 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 HOXC6P09630 235 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 CYBAP13498 195 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
HDAC5-208ENST00000588419 BMP8BP34820 402 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
HDAC5-208ENST00000588419 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
HDAC5-208ENST00000588419 MCM3APO60318 1980 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 WDR46O15213 610 aaKnown RBP16.46■□□□□ 0.23
HDAC5-208ENST00000588419 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 Q7L0L9 218 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 MB21D1Q8N884 522 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 FBXO28Q9NVF7 368 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
HDAC5-208ENST00000588419 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 DNM1LO00429 736 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 COBLO75128 1261 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 PRAMEF19Q5SWL8 479 aa16.45■□□□□ 0.22
HDAC5-208ENST00000588419 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms