RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 GJA8P48165 433 aa27.88■■■□□ 2.05
LSM7-204ENST00000587502 IRX6P78412 446 aaPredicted RBP27.88■■■□□ 2.05
LSM7-204ENST00000587502 COG2Q14746 738 aa27.88■■■□□ 2.05
LSM7-204ENST00000587502 SMC5Q8IY18 1101 aa27.88■■■□□ 2.05
LSM7-204ENST00000587502 ROBO3Q96MS0 1386 aa27.87■■■□□ 2.05
LSM7-204ENST00000587502 SMIM22K7EJ46 135 aa27.87■■■□□ 2.05
LSM7-204ENST00000587502 PRPF38BQ5VTL8 546 aaKnown RBP27.87■■■□□ 2.05
LSM7-204ENST00000587502 VCPKMTQ9H867 229 aa27.87■■■□□ 2.05
LSM7-204ENST00000587502 CWC22Q9HCG8 908 aaKnown RBP27.87■■■□□ 2.05
LSM7-204ENST00000587502 HMGCRP04035 888 aa27.86■■■□□ 2.05
LSM7-204ENST00000587502 XRCC5P13010 732 aaKnown RBP27.86■■■□□ 2.05
LSM7-204ENST00000587502 PLEKHH3Q7Z736 793 aa27.86■■■□□ 2.05
LSM7-204ENST00000587502 SIAH1Q8IUQ4 282 aa27.86■■■□□ 2.05
LSM7-204ENST00000587502 TRMT44Q8IYL2 757 aaKnown RBP27.86■■■□□ 2.05
LSM7-204ENST00000587502 IFNL3Q8IZI9 196 aa27.86■■■□□ 2.05
LSM7-204ENST00000587502 TANGO6Q9C0B7 1094 aa27.86■■■□□ 2.05
LSM7-204ENST00000587502 SPDYE16A6NNV3 312 aaPredicted RBP27.85■■■□□ 2.05
LSM7-204ENST00000587502 POTEEQ6S8J3 1075 aa27.85■■■□□ 2.05
LSM7-204ENST00000587502 GPR142Q7Z601 462 aa27.85■■■□□ 2.05
LSM7-204ENST00000587502 LNPKQ9C0E8 428 aa27.85■■■□□ 2.05
LSM7-204ENST00000587502 UNC93B1Q9H1C4 597 aa27.85■■■□□ 2.05
LSM7-204ENST00000587502 EPB41L4AQ9HCS5 686 aaPredicted RBP27.85■■■□□ 2.05
LSM7-204ENST00000587502 PEX10O60683 326 aa27.84■■■□□ 2.05
LSM7-204ENST00000587502 CNMDO75829 334 aa27.84■■■□□ 2.05
LSM7-204ENST00000587502 SLC3A2P08195 630 aaKnown RBP27.84■■■□□ 2.05
LSM7-204ENST00000587502 EEF2P13639 858 aaKnown RBP27.84■■■□□ 2.05
LSM7-204ENST00000587502 MB21D1Q8N884 522 aa27.84■■■□□ 2.05
LSM7-204ENST00000587502 SEC62Q99442 399 aaKnown RBP27.84■■■□□ 2.05
LSM7-204ENST00000587502 PORCNQ9H237 461 aa27.84■■■□□ 2.05
LSM7-204ENST00000587502 GOPCQ9HD26 462 aa27.84■■■□□ 2.05
LSM7-204ENST00000587502 WDR46O15213 610 aaKnown RBP27.83■■■□□ 2.05
LSM7-204ENST00000587502 RASA1P20936 1047 aa27.83■■■□□ 2.05
LSM7-204ENST00000587502 ATP2B2Q01814 1243 aa27.83■■■□□ 2.05
LSM7-204ENST00000587502 ZNF444Q8N0Y2 327 aaPredicted RBP27.83■■■□□ 2.05
LSM7-204ENST00000587502 NAPBQ9H115 298 aa27.83■■■□□ 2.05
LSM7-204ENST00000587502 CYP2B6P20813 491 aa27.82■■■□□ 2.04
LSM7-204ENST00000587502 RGS2P41220 211 aa27.82■■■□□ 2.04
LSM7-204ENST00000587502 CLEC10AQ8IUN9 316 aa27.82■■■□□ 2.04
LSM7-204ENST00000587502 U2AF1L4Q8WU68 220 aaKnown RBP27.82■■■□□ 2.04
LSM7-204ENST00000587502 SGPL1O95470 568 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 PDE4BQ07343 736 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 MORN1Q5T089 497 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 B4GALNT3Q6L9W6 998 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 CHD1LQ86WJ1 897 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 SPICE1Q8N0Z3 855 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 SHISA4Q96DD7 197 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 PAK6Q9NQU5 681 aaPredicted RBP27.81■■■□□ 2.04
LSM7-204ENST00000587502 HELLSQ9NRZ9 838 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 BTBD7Q9P203 1132 aa27.81■■■□□ 2.04
LSM7-204ENST00000587502 FLOT1O75955 427 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 IGHDP01880 384 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 DSG3P32926 999 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 NUCB1Q02818 461 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 KIAA1755Q5JYT7 1200 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 STK11IPQ8N1F8 1099 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 USP6NLQ92738 828 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.8■■■□□ 2.04
LSM7-204ENST00000587502 NYAP2Q9P242 653 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 IVNS1ABPQ9Y6Y0 642 aa27.8■■■□□ 2.04
LSM7-204ENST00000587502 RPTORQ8N122 1335 aa27.79■■■□□ 2.04
LSM7-204ENST00000587502 SLC15A5A6NIM6 579 aa27.79■■■□□ 2.04
LSM7-204ENST00000587502 WDR78Q5VTH9 848 aa27.79■■■□□ 2.04
LSM7-204ENST00000587502 PLXNB2O15031 1838 aa27.78■■■□□ 2.04
LSM7-204ENST00000587502 ZKSCAN1P17029 563 aaPredicted RBP27.78■■■□□ 2.04
LSM7-204ENST00000587502 APBA2Q99767 749 aa27.78■■■□□ 2.04
LSM7-204ENST00000587502 HMX1Q9NP08 348 aaPredicted RBP27.78■■■□□ 2.04
LSM7-204ENST00000587502 TRIM6-TRIM34B2RNG4 842 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 TFRCP02786 760 aaKnown RBP27.77■■■□□ 2.04
LSM7-204ENST00000587502 PTPREP23469 700 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 PPARAQ07869 468 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 MAP2K5Q13163 448 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 SHCBP1Q8NEM2 672 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 TRIB2Q92519 343 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 DEFB118Q96PH6 123 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 SPATC1LQ9H0A9 340 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.77■■■□□ 2.04
LSM7-204ENST00000587502 OSBPL3Q9H4L5 887 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 SYNPO2Q9UMS6 1093 aa27.77■■■□□ 2.04
LSM7-204ENST00000587502 STRNO43815 780 aa27.76■■■□□ 2.03
LSM7-204ENST00000587502 MCMDC2Q4G0Z9 681 aa27.76■■■□□ 2.03
LSM7-204ENST00000587502 GREB1LQ9C091 1923 aaPredicted RBP27.75■■■□□ 2.03
LSM7-204ENST00000587502 RAD21O60216 631 aa27.75■■■□□ 2.03
LSM7-204ENST00000587502 PRDM1O75626 825 aa27.75■■■□□ 2.03
LSM7-204ENST00000587502 PPP4R3BQ5MIZ7 849 aa27.75■■■□□ 2.03
LSM7-204ENST00000587502 CCDC129Q6ZRS4 1044 aa27.75■■■□□ 2.03
LSM7-204ENST00000587502 IGKV6D-41A0A0C4DH26 115 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 TSPY3P0CV98 308 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 TSPY8P0CW00 308 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 GRB14Q14449 540 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 MAP3K21Q5TCX8 1036 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 PLEKHM2Q8IWE5 1019 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 RILPL2Q969X0 211 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 MOV10L1Q9BXT6 1211 aaKnown RBP27.74■■■□□ 2.03
LSM7-204ENST00000587502 CRISPLD2Q9H0B8 497 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 MROH8Q9H579 483 aa27.74■■■□□ 2.03
LSM7-204ENST00000587502 RLFQ13129 1914 aa27.73■■■□□ 2.03
LSM7-204ENST00000587502 FARP2O94887 1054 aaPredicted RBP27.73■■■□□ 2.03
LSM7-204ENST00000587502 TTLL1O95922 423 aa27.73■■■□□ 2.03
LSM7-204ENST00000587502 ALX1Q15699 326 aa27.73■■■□□ 2.03
LSM7-204ENST00000587502 UBE2Q1Q7Z7E8 422 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms