RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 MTMR2Q13614 643 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 TREML2Q5T2D2 321 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 TRIM47Q96LD4 638 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 KIAA1683Q9H0B3 1180 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 INCENPQ9NQS7 918 aa20.42■□□□□ 0.86
DNMT1-212ENST00000587197 ECM2O94769 699 aaPredicted RBP20.41■□□□□ 0.86
DNMT1-212ENST00000587197 TSPY3P0CV98 308 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 TSPY8P0CW00 308 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 USP14P54578 494 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 SIAH1Q8IUQ4 282 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 RAET1EQ8TD07 263 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 NYAP2Q9P242 653 aa20.41■□□□□ 0.86
DNMT1-212ENST00000587197 TSPY2A6NKD2 308 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 RANBP6O60518 1105 aaKnown RBP20.4■□□□□ 0.86
DNMT1-212ENST00000587197 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
DNMT1-212ENST00000587197 IRX3P78415 501 aaPredicted RBP20.4■□□□□ 0.86
DNMT1-212ENST00000587197 USP17L2Q6R6M4 530 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 MYPNQ86TC9 1320 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 ACER1Q8TDN7 264 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 C12orf42Q96LP6 360 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 KRT23Q9C075 422 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 SH2D4AQ9H788 454 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 ARHGEF10LQ9HCE6 1279 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 TCP11L1Q9NUJ3 509 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 MTMR4Q9NYA4 1195 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 SYNPO2Q9UMS6 1093 aa20.4■□□□□ 0.86
DNMT1-212ENST00000587197 LOC285556D6RIA3 1793 aa20.39■□□□□ 0.86
DNMT1-212ENST00000587197 HOXA7P31268 230 aaPredicted RBP20.39■□□□□ 0.85
DNMT1-212ENST00000587197 FAM110CQ1W6H9 321 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 FAM47AQ5JRC9 791 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 ESR2Q92731 530 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 MKL1Q969V6 931 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 ZNF333Q96JL9 665 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 ASCC2Q9H1I8 757 aaPredicted RBP20.39■□□□□ 0.85
DNMT1-212ENST00000587197 TOMM22Q9NS69 142 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 TMX2Q9Y320 296 aa20.39■□□□□ 0.85
DNMT1-212ENST00000587197 NEDD4P46934 1319 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 A0A1W2PRG0 241 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
DNMT1-212ENST00000587197 EEF2P13639 858 aaKnown RBP20.38■□□□□ 0.85
DNMT1-212ENST00000587197 CTGFP29279 349 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 NOVP48745 357 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
DNMT1-212ENST00000587197 RNF20Q5VTR2 975 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 COA7Q96BR5 231 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 CEP95Q96GE4 821 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 FEZ1Q99689 392 aa20.38■□□□□ 0.85
DNMT1-212ENST00000587197 GREB1LQ9C091 1923 aaPredicted RBP20.37■□□□□ 0.85
DNMT1-212ENST00000587197 LAMA4Q16363 1823 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 SLC27A2O14975 620 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 TTLL1O95922 423 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 GRK4P32298 578 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 EMILIN3Q9NT22 766 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 MYH8P13535 1937 aa20.37■□□□□ 0.85
DNMT1-212ENST00000587197 TRDNQ13061 729 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 TSGA10IPQ3SY00 556 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 CCDC178Q5BJE1 867 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 CLEC10AQ8IUN9 316 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 SH3TC2Q8TF17 1288 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 GTF3C2Q8WUA4 911 aaPredicted RBP20.36■□□□□ 0.85
DNMT1-212ENST00000587197 LPAR1Q92633 364 aa20.36■□□□□ 0.85
DNMT1-212ENST00000587197 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 B4E1Z4 1266 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 E7EWF7 191 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 UBXN2AP68543 259 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 PRKCZQ05513 592 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 KCNB2Q92953 911 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 TTC14Q96N46 770 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 VCPKMTQ9H867 229 aa20.35■□□□□ 0.85
DNMT1-212ENST00000587197 POTEFA5A3E0 1075 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 KDM4AO75164 1064 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 IQCA1Q86XH1 822 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 SLAIN1Q8ND83 568 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 NCOA7Q8NI08 942 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
DNMT1-212ENST00000587197 GOPCQ9HD26 462 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 ZSWIM5Q9P217 1185 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 BIN2Q9UBW5 565 aaPredicted RBP20.34■□□□□ 0.85
DNMT1-212ENST00000587197 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 TAF6LQ9Y6J9 622 aa20.34■□□□□ 0.85
DNMT1-212ENST00000587197 MGAMO43451 1857 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 HSPA4P34932 840 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 FLT3LGP49771 235 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 HERVK_113P62684 666 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 DGKHQ86XP1 1220 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 NKX2-3Q8TAU0 364 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 ANKS1AQ92625 1134 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 USP26Q9BXU7 913 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.85
DNMT1-212ENST00000587197 USP17L15C9J2P7 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L13C9JLJ4 530 aa20.32■□□□□ 0.84
DNMT1-212ENST00000587197 USP17L11C9JVI0 530 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms