RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 ZKSCAN3Q9BRR0 538 aa25.33■■□□□ 1.65
RETREG3-204ENST00000586796 KRT23Q9C075 422 aa25.33■■□□□ 1.65
RETREG3-204ENST00000586796 ASCC2Q9H1I8 757 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-204ENST00000586796 RPAP3Q9H6T3 665 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-204ENST00000586796 GOPCQ9HD26 462 aa25.33■■□□□ 1.65
RETREG3-204ENST00000586796 GREB1LQ9C091 1923 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-204ENST00000586796 ZNF296Q8WUU4 475 aaPredicted RBP25.32■■□□□ 1.64
RETREG3-204ENST00000586796 CNNM2Q9H8M5 875 aa25.32■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L15C9J2P7 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L13C9JLJ4 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L11C9JVI0 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L18D6R9N7 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L22D6RA61 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L17D6RBQ6 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L19D6RCP7 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L20D6RJB6 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 HOXA7P31268 230 aaPredicted RBP25.31■■□□□ 1.64
RETREG3-204ENST00000586796 USP17L24Q0WX57 530 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 TRDNQ13061 729 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 CREB3L3Q68CJ9 461 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 CHMP4CQ96CF2 233 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 TANGO6Q9C0B7 1094 aa25.31■■□□□ 1.64
RETREG3-204ENST00000586796 E7EWF7 191 aa25.3■■□□□ 1.64
RETREG3-204ENST00000586796 SLC27A2O14975 620 aa25.3■■□□□ 1.64
RETREG3-204ENST00000586796 FKTNO75072 461 aa25.3■■□□□ 1.64
RETREG3-204ENST00000586796 ECM2O94769 699 aaPredicted RBP25.3■■□□□ 1.64
RETREG3-204ENST00000586796 PPP4R3BQ5MIZ7 849 aa25.3■■□□□ 1.64
RETREG3-204ENST00000586796 LPAR1Q92633 364 aa25.3■■□□□ 1.64
RETREG3-204ENST00000586796 P2RX7Q99572 595 aaKnown RBP25.3■■□□□ 1.64
RETREG3-204ENST00000586796 F5H6K3 240 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 KLRC3Q07444 240 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 NECTIN1Q15223 517 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 SAMD1Q6SPF0 538 aaPredicted RBP25.29■■□□□ 1.64
RETREG3-204ENST00000586796 CATSPERGQ6ZRH7 1159 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 STOX1Q6ZVD7 989 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 RALYLQ86SE5 291 aaKnown RBP25.29■■□□□ 1.64
RETREG3-204ENST00000586796 MKL1Q969V6 931 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 PRDM10Q9NQV6 1147 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 TCP11L1Q9NUJ3 509 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 ZSWIM5Q9P217 1185 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 MTMR7Q9Y216 660 aa25.29■■□□□ 1.64
RETREG3-204ENST00000586796 REC8O95072 547 aa25.28■■□□□ 1.64
RETREG3-204ENST00000586796 SP3Q02447 781 aa25.28■■□□□ 1.64
RETREG3-204ENST00000586796 C17orf99Q6UX52 265 aa25.28■■□□□ 1.64
RETREG3-204ENST00000586796 IQCA1Q86XH1 822 aa25.28■■□□□ 1.64
RETREG3-204ENST00000586796 NUP88Q99567 741 aaPredicted RBP25.28■■□□□ 1.64
RETREG3-204ENST00000586796 ADGRA2Q96PE1 1338 aa25.28■■□□□ 1.64
RETREG3-204ENST00000586796 WDR46O15213 610 aaKnown RBP25.27■■□□□ 1.64
RETREG3-204ENST00000586796 NDUFB10O96000 172 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 FAM83BQ5T0W9 1011 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 RNF20Q5VTR2 975 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 CYB5R4Q7L1T6 521 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 ANKRD13CQ8N6S4 541 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 NCOA7Q8NI08 942 aa25.27■■□□□ 1.64
RETREG3-204ENST00000586796 ISY1Q9ULR0 285 aaKnown RBP25.27■■□□□ 1.64
RETREG3-204ENST00000586796 HERVK_113P62684 666 aa25.26■■□□□ 1.63
RETREG3-204ENST00000586796 NOM1Q5C9Z4 860 aaKnown RBP25.26■■□□□ 1.63
RETREG3-204ENST00000586796 SLFN13Q68D06 897 aa25.26■■□□□ 1.63
RETREG3-204ENST00000586796 TMEM47Q9BQJ4 181 aa25.26■■□□□ 1.63
RETREG3-204ENST00000586796 UBAC1Q9BSL1 405 aa25.26■■□□□ 1.63
RETREG3-204ENST00000586796 NT5C2P49902 561 aa25.25■■□□□ 1.63
RETREG3-204ENST00000586796 CHST3Q7LGC8 479 aa25.25■■□□□ 1.63
RETREG3-204ENST00000586796 CD99L2Q8TCZ2 262 aa25.25■■□□□ 1.63
RETREG3-204ENST00000586796 ZSCAN10Q96SZ4 725 aaPredicted RBP25.25■■□□□ 1.63
RETREG3-204ENST00000586796 PEX10O60683 326 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 FLOT1O75955 427 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 BCRP11274 1271 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 TOP1P11387 765 aaKnown RBP25.24■■□□□ 1.63
RETREG3-204ENST00000586796 RCSD1Q6JBY9 416 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 GMCL1P1Q8NEA9 526 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 TTC14Q96N46 770 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 PAGR1Q9BTK6 254 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 SYNPO2Q9UMS6 1093 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 MYH4Q9Y623 1939 aa25.24■■□□□ 1.63
RETREG3-204ENST00000586796 TNKSO95271 1327 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 MCCP23508 829 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 GCLCP48506 637 aaPredicted RBP25.23■■□□□ 1.63
RETREG3-204ENST00000586796 NOVP48745 357 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 COG2Q14746 738 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 CCDC178Q5BJE1 867 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 ERO1AQ96HE7 468 aa25.23■■□□□ 1.63
RETREG3-204ENST00000586796 CASP8AP2Q9UKL3 1982 aa25.22■■□□□ 1.63
RETREG3-204ENST00000586796 COL13A1Q5TAT6 717 aaPredicted RBP25.22■■□□□ 1.63
RETREG3-204ENST00000586796 RASGRP2Q7LDG7 609 aa25.22■■□□□ 1.63
RETREG3-204ENST00000586796 DGKHQ86XP1 1220 aa25.22■■□□□ 1.63
RETREG3-204ENST00000586796 FBXO28Q9NVF7 368 aa25.22■■□□□ 1.63
RETREG3-204ENST00000586796 SPDYE16A6NNV3 312 aaPredicted RBP25.21■■□□□ 1.63
RETREG3-204ENST00000586796 ZKSCAN1P17029 563 aaPredicted RBP25.21■■□□□ 1.63
RETREG3-204ENST00000586796 SLC1A4P43007 532 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 KIF22Q14807 665 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 RASEFQ8IZ41 740 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 ENAHQ8N8S7 591 aaPredicted RBP25.21■■□□□ 1.63
RETREG3-204ENST00000586796 ARHGAP39Q9C0H5 1083 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 TXNRD2Q9NNW7 524 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 HOXC10Q9NYD6 342 aa25.21■■□□□ 1.63
RETREG3-204ENST00000586796 IFIT3O14879 490 aaKnown RBP25.2■■□□□ 1.62
RETREG3-204ENST00000586796 BMP3P12645 472 aa25.2■■□□□ 1.62
RETREG3-204ENST00000586796 LACTBP83111 547 aaPredicted RBP25.2■■□□□ 1.62
RETREG3-204ENST00000586796 CCDC96Q2M329 555 aa25.2■■□□□ 1.62
RETREG3-204ENST00000586796 POTEEQ6S8J3 1075 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms