RNA–Protein interactions for RNA: ENST00000584592.5

CDK5RAP3-235, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-235ENST00000584592 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MB21D2Q8IYB1 491 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 NEDD1Q8NHV4 660 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ESR2Q92731 530 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 DYNLL2Q96FJ2 89 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 LAMA2P24043 3122 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-235ENST00000584592 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TTC14Q96N46 770 aa13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 NEDD4P46934 1319 aa13.13□□□□□ -0.31
CDK5RAP3-235ENST00000584592 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SGPL1O95470 568 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 GRK4P32298 578 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MCM5P33992 734 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 EVCP57679 992 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 KIF22Q14807 665 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RABEP1Q15276 862 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 IGDCC4Q8TDY8 1250 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RNF208Q9H0X6 261 aa13.12□□□□□ -0.31
CDK5RAP3-235ENST00000584592 B4E1Z4 1266 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TLR2O60603 784 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CAP2P40123 477 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 LIFRP42702 1097 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ANTXR2P58335 489 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TFAP4Q01664 338 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 BLOC1S2Q6QNY1 142 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MKL1Q969V6 931 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
CDK5RAP3-235ENST00000584592 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 KDM4AO75164 1064 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 PRDM1O75626 825 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SEC23AQ15436 765 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ASNSP08243 561 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SLURP2P0DP57 97 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ANKRD13AQ8IZ07 590 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
CDK5RAP3-235ENST00000584592 CDH23Q9H251 3354 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 PRC1O43663 620 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 AKR1B1P15121 316 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 NEK4P51957 841 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 UBXN2AP68543 259 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 JAG1P78504 1218 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
CDK5RAP3-235ENST00000584592 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms