RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 PHKBQ93100 1093 aa16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
SMARCD2-211ENST00000584483 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CALM1P0DP23 149 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CALM2P0DP24 149 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CALM3P0DP25 149 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 IFNAR1P17181 557 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 ECE1P42892 770 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 ICA1Q05084 483 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 PRKG1Q13976 671 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 KIAA1755Q5JYT7 1200 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CCDC82Q8N4S0 544 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
SMARCD2-211ENST00000584483 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 PDHBP11177 359 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 SYT1P21579 422 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 SUPT20HL1Q3ZLR7 823 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 MAP1SQ66K74 1059 aaPredicted RBP16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 ZNF526Q8TF50 670 aaPredicted RBP16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 AIFM3Q96NN9 605 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
SMARCD2-211ENST00000584483 TRAF5O00463 557 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 CPLX1O14810 134 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 PPP2R5BQ15173 497 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 MOB2Q70IA6 237 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 CPVLQ9H3G5 476 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 ORC3Q9UBD5 711 aaPredicted RBP16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 TMX2Q9Y320 296 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 MYH6P13533 1939 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
SMARCD2-211ENST00000584483 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 hCG_1642624A0A1W2PR95 340 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 CYTH3O43739 400 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 FMNL1O95466 1100 aaPredicted RBP16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 ASNSP08243 561 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 PKN1Q16512 942 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 SHISA4Q96DD7 197 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 SLC26A6Q9BXS9 759 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 GJB4Q9NTQ9 266 aa16.67■□□□□ 0.26
SMARCD2-211ENST00000584483 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 F5H6K3 240 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 BRD1O95696 1058 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 KLRC3Q07444 240 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 ZNF543Q08ER8 600 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 NOL9Q5SY16 702 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 TTBK2Q6IQ55 1244 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 SCYL3Q8IZE3 742 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 MTMR6Q9Y217 621 aa16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
SMARCD2-211ENST00000584483 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 NDUFB10O96000 172 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 PTPRAP18433 802 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 KIF5BP33176 963 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 FOSBP53539 338 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 SSRP1Q08945 709 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 FOXD4L5Q5VV16 416 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 FOXD4L4Q8WXT5 416 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 STK36Q9NRP7 1315 aa16.65■□□□□ 0.26
SMARCD2-211ENST00000584483 STX6O43752 255 aa16.64■□□□□ 0.25
SMARCD2-211ENST00000584483 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
SMARCD2-211ENST00000584483 DGKZQ13574 1117 aa16.64■□□□□ 0.25
SMARCD2-211ENST00000584483 CPLX2Q6PUV4 134 aaKnown RBP16.64■□□□□ 0.25
SMARCD2-211ENST00000584483 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
SMARCD2-211ENST00000584483 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms