RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.54□□□□□ -0.72
CRLF3-205ENST00000583805 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
CRLF3-205ENST00000583805 CCDC8Q9H0W5 538 aaPredicted RBP10.54□□□□□ -0.72
CRLF3-205ENST00000583805 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
CRLF3-205ENST00000583805 PIH1D3Q9NQM4 214 aaKnown RBP10.54□□□□□ -0.72
CRLF3-205ENST00000583805 MORF4L1Q9UBU8 362 aa10.54□□□□□ -0.72
CRLF3-205ENST00000583805 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
CRLF3-205ENST00000583805 DDX19BQ9UMR2 479 aa10.54□□□□□ -0.72
CRLF3-205ENST00000583805 FARP2O94887 1054 aaPredicted RBP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 SGPL1O95470 568 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 HMGCRP04035 888 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 USP5P45974 858 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 RRP1BQ14684 758 aaKnown RBP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 MYSM1Q5VVJ2 828 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 UBE2Q1Q7Z7E8 422 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 CLASRPQ8N2M8 674 aaKnown RBP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 KCTD17Q8N5Z5 321 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 MAGEB6Q8N7X4 407 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 KIF1BPQ96EK5 621 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 PAK6Q9NQU5 681 aaPredicted RBP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 TLR7Q9NYK1 1049 aaKnown RBP10.53□□□□□ -0.72
CRLF3-205ENST00000583805 SERPINB13Q9UIV8 391 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 EXOC6BQ9Y2D4 811 aa10.53□□□□□ -0.72
CRLF3-205ENST00000583805 TRIOBPQ9H2D6 2365 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 USP14P54578 494 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 HERVK_113P62684 666 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 TSR1Q2NL82 804 aaKnown RBP10.52□□□□□ -0.73
CRLF3-205ENST00000583805 TATDN1Q6P1N9 297 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 TRMT44Q8IYL2 757 aaKnown RBP10.52□□□□□ -0.73
CRLF3-205ENST00000583805 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 NR2E3Q9Y5X4 410 aa10.52□□□□□ -0.73
CRLF3-205ENST00000583805 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 GDF11O95390 407 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 ELNP15502 786 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 MAPK4P31152 587 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 DYNLL1P63167 89 aaKnown RBP10.51□□□□□ -0.73
CRLF3-205ENST00000583805 PDE3AQ14432 1141 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 GPRC5AQ8NFJ5 357 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 PANK1Q8TE04 598 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 SLC39A7Q92504 469 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 DPF3Q92784 378 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 FEZ1Q99689 392 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 CABP5Q9NP86 173 aa10.51□□□□□ -0.73
CRLF3-205ENST00000583805 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
CRLF3-205ENST00000583805 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
CRLF3-205ENST00000583805 MAGEB6P1A0A0J9YX57 407 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 H0YGN5 161 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 XRCC5P13010 732 aaKnown RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 ERVK-24P63145 666 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 CCNA1P78396 465 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 CCAR1Q8IX12 1150 aaKnown RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 DEFB118Q96PH6 123 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 TRAIPQ9BWF2 469 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 CRNKL1Q9BZJ0 848 aaKnown RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 HMX1Q9NP08 348 aaPredicted RBP10.5□□□□□ -0.73
CRLF3-205ENST00000583805 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
CRLF3-205ENST00000583805 A0A1W2PPC1 479 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 GLRX3O76003 335 aaKnown RBP10.49□□□□□ -0.73
CRLF3-205ENST00000583805 GH2P01242 217 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 TFRCP02786 760 aaKnown RBP10.49□□□□□ -0.73
CRLF3-205ENST00000583805 RFC5P40937 340 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 ABCB5Q2M3G0 1257 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 NECAB2Q7Z6G3 386 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 POM121Q96HA1 1249 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
CRLF3-205ENST00000583805 KIAA1683Q9H0B3 1180 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 ANTXR1Q9H6X2 564 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 IL1RAPL2Q9NP60 686 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 ZBTB40Q9NUA8 1239 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 GJD2Q9UKL4 321 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
CRLF3-205ENST00000583805 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
CRLF3-205ENST00000583805 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
CRLF3-205ENST00000583805 C7P10643 843 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms