RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 BMP6P22004 513 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 HLFQ16534 295 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 IQCEQ6IPM2 695 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 BCAS4Q8TDM0 211 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 GOLGA6L10A6NI86 522 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 BUB1O43683 1085 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 PTPREP23469 700 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 GYG1P46976 350 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 CUL4BQ13620 913 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 DZIP3Q86Y13 1208 aaKnown RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 OR8K1Q8NGG5 319 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 NOC4LQ9BVI4 516 aaKnown RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 LY9Q9HBG7 655 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 INTS13Q9NVM9 706 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 ZNF185O15231 689 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 HSF2BPO75031 334 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 PPARAQ07869 468 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 NLRC4Q9NPP4 1024 aa11.88□□□□□ -0.51
RNF43-207ENST00000583753 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
RNF43-207ENST00000583753 TMCO5BA8MYB1 307 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 GNGT1P63211 74 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 TAX1BP1Q86VP1 789 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 TMTC2Q8N394 836 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 SMCR8Q8TEV9 937 aaPredicted RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 TACC1O75410 805 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 DYNLL1P63167 89 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 KRT83P78385 493 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 CKAP4Q07065 602 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 PDE4DQ08499 809 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 PTPAQ15257 358 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 STRBPQ96SI9 672 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 CCDC113Q9H0I3 377 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 SMARCAL1Q9NZC9 954 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 PXDNQ92626 1479 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
RNF43-207ENST00000583753 PDE8BO95263 885 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 IFNAR1P17181 557 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
RNF43-207ENST00000583753 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
RNF43-207ENST00000583753 AATFQ9NY61 560 aaKnown RBP eCLIP11.87□□□□□ -0.51
RNF43-207ENST00000583753 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 SMIM23A6NLE4 172 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 PP2D1A8MPX8 630 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 USP17L12C9JPN9 530 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 USP17L21D6R901 530 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 NMT2O60551 498 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 PRPF4BQ13523 1007 aaKnown RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 MCM3P25205 808 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 CDR1P51861 262 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 OTUD6BQ8N6M0 293 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
RNF43-207ENST00000583753 FBXO2Q9UK22 296 aaPredicted RBP11.86□□□□□ -0.51
RNF43-207ENST00000583753 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 ATP8B1O43520 1251 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 GOLGA8HP0CJ92 632 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 SRLQ86TD4 932 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 KLHL7Q8IXQ5 586 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 TAF4BQ92750 862 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 RMND1Q9NWS8 449 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 SRPRBQ9Y5M8 271 aaKnown RBP11.85□□□□□ -0.51
RNF43-207ENST00000583753 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 NDUFA10O95299 355 aa11.85□□□□□ -0.51
RNF43-207ENST00000583753 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
RNF43-207ENST00000583753 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
RNF43-207ENST00000583753 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms