RNA–Protein interactions for RNA: ENST00000581399.5

SPECC1-215, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 2,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-215ENST00000581399 SAMD7Q7Z3H4 446 aa16.38■□□□□ 0.21
SPECC1-215ENST00000581399 FAM151AQ8WW52 585 aa16.38■□□□□ 0.21
SPECC1-215ENST00000581399 USP28Q96RU2 1077 aa16.38■□□□□ 0.21
SPECC1-215ENST00000581399 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
SPECC1-215ENST00000581399 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
SPECC1-215ENST00000581399 PALM3A6NDB9 673 aaPredicted RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 CYTH3O43739 400 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 KIF5BP33176 963 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 GSE1Q14687 1217 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 USP17L2Q6R6M4 530 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 WASF1Q92558 559 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 SBF1O95248 1867 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 ASTN2O75129 1339 aaPredicted RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 GDF11O95390 407 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
SPECC1-215ENST00000581399 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
SPECC1-215ENST00000581399 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
SPECC1-215ENST00000581399 MMP1P03956 469 aa16.36■□□□□ 0.21
SPECC1-215ENST00000581399 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
SPECC1-215ENST00000581399 CCDC17Q96LX7 622 aa16.36■□□□□ 0.21
SPECC1-215ENST00000581399 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
SPECC1-215ENST00000581399 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 BTBD18B2RXH4 712 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 TTLL1O95922 423 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 U2AF2P26368 475 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 SIAH1Q8IUQ4 282 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 DPF2Q92785 391 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 TMEM63CQ9P1W3 806 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
SPECC1-215ENST00000581399 PDHBP11177 359 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 LMNB1P20700 586 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 TRIM29Q14134 588 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 SEPT2Q15019 361 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
SPECC1-215ENST00000581399 ELP1O95163 1332 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 MYO1BO43795 1136 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 UBE2HP62256 183 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 ATP2B2Q01814 1243 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 NR5A1Q13285 461 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
SPECC1-215ENST00000581399 PGBD1Q96JS3 809 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPECC1-215ENST00000581399 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
SPECC1-215ENST00000581399 ADAMTS3O15072 1205 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 MBD3O95983 291 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
SPECC1-215ENST00000581399 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.2
SPECC1-215ENST00000581399 NPY5RQ15761 445 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
SPECC1-215ENST00000581399 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
SPECC1-215ENST00000581399 SNHG28P0DPA3 235 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 SCG2P13521 617 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.2
SPECC1-215ENST00000581399 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
SPECC1-215ENST00000581399 GH2P01242 217 aa16.32■□□□□ 0.2
SPECC1-215ENST00000581399 GNAQP50148 359 aa16.32■□□□□ 0.2
SPECC1-215ENST00000581399 RASA3Q14644 834 aa16.32■□□□□ 0.2
SPECC1-215ENST00000581399 CSPP1Q1MSJ5 1256 aa16.32■□□□□ 0.2
SPECC1-215ENST00000581399 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SPECC1-215ENST00000581399 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
SPECC1-215ENST00000581399 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 ZNF396Q96N95 335 aaPredicted RBP16.31■□□□□ 0.2
SPECC1-215ENST00000581399 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
SPECC1-215ENST00000581399 ATL3Q6DD88 541 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 TMEM179Q6ZVK1 233 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 MKL1Q969V6 931 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
SPECC1-215ENST00000581399 FAM205CA6NFA0 338 aa16.3■□□□□ 0.2
SPECC1-215ENST00000581399 MMP14P50281 582 aa16.3■□□□□ 0.2
SPECC1-215ENST00000581399 ICA1Q05084 483 aa16.3■□□□□ 0.2
SPECC1-215ENST00000581399 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
SPECC1-215ENST00000581399 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
SPECC1-215ENST00000581399 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms